RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ZNF600Q6ZNG1 722 aa13.1□□□□□ -0.31
PCDHGB1-202ENST00000611598 ZNF700Q9H0M5 742 aa13.1□□□□□ -0.31
PCDHGB1-202ENST00000611598 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
PCDHGB1-202ENST00000611598 TNRC18O15417 2968 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SSSCA1O60232 199 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SPNS3Q6ZMD2 512 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SLC25A45Q8N413 288 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SPSB1Q96BD6 273 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SPACA9Q96E40 222 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 GLRX2Q9NS18 164 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SDK2Q58EX2 2172 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 NXPH3O95157 252 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 GLB1P16278 677 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 EPHA1P21709 976 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 CDX1P47902 265 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 RUNX1Q01196 453 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 ELOBQ15370 118 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 CYB561D1Q8N8Q1 229 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 OR14L1PQ8NHC6 308 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 C10orf35Q96D05 121 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 TMED3Q9Y3Q3 217 aa13.09□□□□□ -0.31
PCDHGB1-202ENST00000611598 TGIF2-C20orf24A0A0A6YYL0 155 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 TERTO14746 1132 aaKnown RBP13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 CST7O76096 145 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 PATE4P0C8F1 98 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 UBE2KP61086 200 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 DLK1P80370 383 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 FOXL2NBQ6ZUU3 175 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 OR6C1Q96RD1 312 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF286AQ9HBT8 521 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 ST3GAL6Q9Y274 331 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 CHCHD2Q9Y6H1 151 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF729A6NN14 1252 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 NPIPA2E9PIF3 369 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 NPIPA3F8WFD2 350 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 G3V3Y1 287 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 DKK1O94907 266 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 SLC34A2O95436 690 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 CELA2AP08217 269 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 RBP2P50120 134 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 HERV-K104P61576 105 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 GFI1BQ5VTD9 330 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF774Q6NX45 483 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 ODF3L1Q8IXM7 274 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM217Q8N7C4 229 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 BORCS8Q96FH0 119 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 PFDN5Q99471 154 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 ULBP2Q9BZM5 246 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 AKIRIN1Q9H9L7 192 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 SLC7A11Q9UPY5 501 aa13.08□□□□□ -0.32
PCDHGB1-202ENST00000611598 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 MPPED1O15442 326 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 PITX3O75364 302 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 PPYP01298 95 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 CRYGSP22914 178 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 NKX2-1P43699 371 aaPredicted RBP13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF266Q14584 549 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 ICAM4Q14773 271 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 OSR2Q8N2R0 312 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF383Q8NA42 475 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 OR5C1Q8NGR4 320 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 P4HTMQ9NXG6 502 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 TRDCB7Z8K6 153 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 WRBO00258 174 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 GATCO43716 136 aaKnown RBP13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 LY86O95711 162 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM50AO95807 157 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 RABEPKQ7Z6M1 372 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF429Q86V71 674 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 KMT5CQ86Y97 462 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM252Q8N6L7 170 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 SMRP1Q8NCR6 262 aa13.07□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BKO60814 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 SCRG1O75711 98 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 LCATP04180 440 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BJP06899 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 KLK3P07288 261 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 NR2C1P13056 603 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BOP23527 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BBP33778 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HAAOP46952 286 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 RGS19P49795 217 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 UCP3P55916 312 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BDP58876 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BCP62807 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST2H2BEQ16778 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms