RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 BEX1Q9HBH7 125 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 TMEM27Q9HBJ8 222 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 FGFR1OP2Q9NVK5 253 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 OR52A1Q9UKL2 312 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 YTHDF2Q9Y5A9 579 aaKnown RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 KCNE3Q9Y6H6 103 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 PCDH11XQ9BZA7 1347 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 CCNB3Q8WWL7 1395 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 CNTLNQ9NXG0 1405 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ERCC6Q03468 1493 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ZNF518AQ6AHZ1 1483 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 COL4A4P53420 1690 aaPredicted RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 A0A1B0GV72 72 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 TINCRA0A1B0GVN0 87 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SMIM9A6NGZ8 99 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SYCE1LA8MT33 242 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 LINC00587B1AMM8 73 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 OR11H12B2RN74 326 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SEC14L6B5MCN3 397 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 F5H5T6 163 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 PLPP1O14494 284 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 ARPC5O15511 151 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 FKBP6O75344 327 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 RP2O75695 350 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 WISP3O95389 354 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 CRYZL1O95825 349 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 IGHV1-8P0DP01 117 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 ALOX5APP20292 161 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 WARSP23381 471 aaKnown RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 PSMA1P25786 263 aaKnown RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 HTR1DP28221 377 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 ELK4P28324 431 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SLC6A1P30531 599 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 ARR3P36575 388 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 RFC3P40938 356 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SLCO1A2P46721 670 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 AP2S1P53680 142 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 AQP5P55064 265 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 RHOAP61586 193 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 RPL19P84098 196 aaKnown RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 SLC39A6Q13433 755 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 OR2F1Q13607 317 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 CPTPQ5TA50 214 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 NANOGP8Q6NSW7 305 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 CEMP1Q6PRD7 247 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 PLET1Q6UQ28 207 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 C5orf46Q6UWT4 87 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 FAM131AQ6UXB0 335 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 WDR82Q6UXN9 313 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 FBXW12Q6X9E4 464 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 CYHR1Q6ZMK1 362 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 CMC1Q7Z7K0 106 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 CPNE9Q8IYJ1 553 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 BLIDQ8IZY5 108 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 OR6V1Q8N148 313 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 LRRC25Q8N386 305 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 ZNF676Q8N7Q3 588 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 OR11H1Q8NG94 326 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 OR10W1Q8NGF6 305 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 OR11H2Q8NH07 326 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SFXN5Q8TD22 340 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 MAFIPQ8WZ33 124 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 RAB8BQ92930 207 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 EEF1AKMT3Q96AZ1 226 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SEH1LQ96EE3 360 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SEC22CQ9BRL7 303 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 ZNF717Q9BY31 904 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 MRPS26Q9BYN8 205 aaKnown RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 C6orf50Q9HD87 102 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 HMG20AQ9NP66 347 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 TMEM9BQ9NQ34 198 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 IFT46Q9NQC8 304 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 FBXO6Q9NRD1 293 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 AGPAT4Q9NRZ5 378 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SPANXB1Q9NS25 103 aaPredicted RBP2.56□□□□□ -2
SMCHD1-213ENST00000609587 PARVAQ9NVD7 372 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 SDHAF2Q9NX18 166 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 VPREB3Q9UKI3 123 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 TP53TG1Q9Y2A0 90 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 ARL2BPQ9Y2Y0 163 aa2.56□□□□□ -2
SMCHD1-213ENST00000609587 IGLV1-50A0A075B6I6 118 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 ZNF593O00488 134 aaPredicted RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 CRXO43186 299 aaPredicted RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 SLC16A7O60669 478 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 RAD1O60671 282 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 OR2B3O76000 313 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 IFNA21P01568 189 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 MRPL3P09001 348 aaKnown RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 LIPCP11150 499 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 CYBAP13498 195 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 HCCSP53701 268 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 VSX2P58304 361 aaPredicted RBP2.55□□□□□ -2
SMCHD1-213ENST00000609587 ESRRGP62508 458 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 PRDM2Q13029 1718 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 QPRTQ15274 297 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 OR1Q1Q15612 314 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 ZNF726P1Q15940 193 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 TRIQKQ629K1 86 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 IDO2Q6ZQW0 420 aa2.55□□□□□ -2
SMCHD1-213ENST00000609587 DHFR2Q86XF0 187 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms