RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 REG4Q9BYZ8 158 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 NMES1Q9C002 83 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 ANXA10Q9UJ72 324 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 HDGFL3Q9Y3E1 203 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 RANBP2P49792 3224 aaKnown RBP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 CCDC168Q8NDH2 2452 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 FIGNL2A6NMB9 653 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 DVL1P1P54792 670 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 TRA2AQ13595 282 aaKnown RBP eCLIP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF345Q14585 488 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 IGSF11Q5DX21 431 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 FIP1L1Q6UN15 594 aaKnown RBP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 PP6455Q8WZ26 134 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 OR5B12Q96R08 314 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 PLEKHA2Q9HB19 425 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 FAM206AQ9NX38 181 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 RNF150Q9ULK6 438 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 SOX15O60248 233 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 TIAF1O95411 115 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 CCL3P10147 92 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 THBS4P35443 961 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 GPM6AP51674 278 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 GFRALQ6UXV0 394 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 D2HGDHQ8N465 521 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 BMPERQ8N8U9 685 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 ZPBPQ9BS86 351 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 UFSP2Q9NUQ7 469 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF407Q9C0G0 2248 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 G3V3Q6 166 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 FSTP19883 344 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 IGLV3-21P80748 117 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-216ENST00000608263 WFDC8Q8IUA0 241 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 OR5C1Q8NGR4 320 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 ABHD5Q8WTS1 349 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 GAB2Q9UQC2 676 aa9.08□□□□□ -0.96
CTCFL-216ENST00000608263 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 DHRS7CA6NNS2 312 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 GRPP07492 148 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 GABRA2P47869 451 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 MLF1P58340 268 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 PCBD1P61457 104 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 S100A12P80511 92 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF766Q5HY98 468 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF808Q8N4W9 903 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF561Q8N587 486 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 EXTL1Q92935 676 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 CYB5BO43169 146 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 ADAM20O43506 726 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 SUMO3P55854 103 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 TMEM50BP56557 158 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF239Q16600 458 aaKnown RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 FAHD2BQ6P2I3 314 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 WDR74Q6RFH5 385 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 TFAP2EQ6VUC0 442 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 BIVMQ86UB2 503 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 APCDD1LQ8NCL9 501 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 DNASE2BQ8WZ79 361 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 FAHD2AQ96GK7 314 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 IP6K3Q96PC2 410 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 FOXB1Q99853 325 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 IER2Q9BTL4 223 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 SLC26A1Q9H2B4 701 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 IL17BQ9UHF5 180 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 H0YIZ8 118 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 VAMP5O95183 116 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 DEFB108BQ8NET1 73 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 OR6X1Q8NH79 312 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 OR1F12Q8NHA8 337 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF501Q96CX3 271 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
CTCFL-216ENST00000608263 UNC80Q8N2C7 3258 aa9.07□□□□□ -0.96
CTCFL-216ENST00000608263 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 SIRPB1O00241 398 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 CBR3O75828 277 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 MDKP21741 143 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-216ENST00000608263 PTGER4P35408 488 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 FABP6P51161 128 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 TMEM267Q0VDI3 215 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-216ENST00000608263 HMGN3Q15651 99 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 OR56B2PQ8NGI1 322 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 OR1J1Q8NGS3 322 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 SARAFQ96BY9 339 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 RPUSD4Q96CM3 377 aaKnown RBP9.06□□□□□ -0.96
CTCFL-216ENST00000608263 SEC11CQ9BY50 192 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 NAA60Q9H7X0 242 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 ZNF319Q9P2F9 582 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 TIMM10BQ9Y5J6 103 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 FRMPD3Q5JV73 1810 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 TRGV5A0A0B4J1U4 118 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 A0A1W2PR77 199 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 PPP1R2P9O14990 202 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 TIMM8AO60220 97 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-216ENST00000608263 CD74P04233 296 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 FABP1P07148 127 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 IL2RGP31785 369 aa9.06□□□□□ -0.96
CTCFL-216ENST00000608263 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms