RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LINC00597Q9H2U6 94 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 TPT1P8Q9HAU6 139 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 DDIT4Q9NX09 232 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 DEC1Q9P2X7 70 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 NXT1Q9UKK6 140 aaKnown RBP3.54□□□□□ -1.84
LINC00397-202ENST00000606785 KIF25-AS1Q9Y6Z4 181 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 MYH11P35749 1972 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 LMTK2Q8IWU2 1503 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 FYCO1Q9BQS8 1478 aa3.54□□□□□ -1.84
LINC00397-202ENST00000606785 GTF3C1Q12789 2109 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 TONSLQ96HA7 1378 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 ZNFX1Q9P2E3 1918 aaKnown RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 SIGLEC16A6NMB1 481 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 H0Y980 276 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 I3L4J1 428 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 CHST10O43529 356 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 GGCTO75223 188 aaKnown RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 RP2O75695 350 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 TTC4O95801 387 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 IGKV3-15P01624 115 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 IGLV1-47P01700 117 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 HTR1AP08908 422 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 C1GALT1C1LP0DN25 315 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 NELFEP18615 380 aaKnown RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 USF1P22415 310 aaPredicted RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 S100A11P31949 105 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 RBM34P42696 430 aaKnown RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 PSMD8P48556 350 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 CSNK1A1P48729 337 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 FABP6P51161 128 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF138P52744 262 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 COPZ1P61923 177 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 RAP1AP62834 184 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 HMGCS1Q01581 520 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 SPA17Q15506 151 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 ATP6V1FQ16864 119 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 SMIM21Q3B7S5 101 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 TMEM176BQ3YBM2 270 aaPredicted RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 ACSM3Q53FZ2 586 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 IDNKQ5T6J7 187 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 SYT6Q5T7P8 510 aaPredicted RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 RAB43Q86YS6 212 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 C10orf107Q8IVU9 208 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 CBR4Q8N4T8 237 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 TMEM251Q8N6I4 163 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 NPWQ8N729 165 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 CHST4Q8NCG5 386 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 OR13D1Q8NGV5 346 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 OR10K1Q8NGX5 313 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 RDH5Q92781 318 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 RNF170Q96K19 258 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 ZFP3Q96NJ6 502 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 GPR21Q99679 349 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 NRTNQ99748 197 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 MRPS26Q9BYN8 205 aaKnown RBP3.53□□□□□ -1.84
LINC00397-202ENST00000606785 MIXL1Q9H2W2 232 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 NANOGQ9H9S0 305 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 C6orf50Q9HD87 102 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 COPZ2Q9P299 210 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 BAIAP2Q9UQB8 552 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 PSME4Q14997 1843 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 CCDC141Q6ZP82 1450 aa3.53□□□□□ -1.84
LINC00397-202ENST00000606785 SPATA31E1Q6ZUB1 1445 aa3.53□□□□□ -1.85
LINC00397-202ENST00000606785 CAMTA1Q9Y6Y1 1673 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 ABCC12Q96J65 1359 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 CLDN34H7C241 214 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 GABRPO00591 440 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 SCO1O75880 301 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 PTTG1O95997 202 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 CATP04040 527 aaKnown RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 FABP3P05413 133 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 EIF4EP06730 217 aaKnown RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 OR10J4P0C629 311 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 OR8U9P0C7N5 309 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 HLA-GP17693 338 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 RCC1P18754 421 aaPredicted RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 RAB5AP20339 215 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 IVDP26440 423 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 DDTP30046 118 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 PMELP40967 661 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 AKR1C3P42330 323 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 CDKN2BP42772 138 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 MAP2K4P45985 399 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 RPS9P46781 194 aaKnown RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 TTPAP49638 278 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 RAB7AP51149 207 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 XKP51811 444 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 WNT4P56705 351 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 KLF3P57682 345 aaPredicted RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 PKIAP61925 76 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 RANP62826 216 aaKnown RBP3.52□□□□□ -1.85
LINC00397-202ENST00000606785 EMX2Q04743 252 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 BTN1A1Q13410 526 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
LINC00397-202ENST00000606785 ZNF658BQ4V348 819 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms