RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 TMEM225BP0DP42 221 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 JUNBP17275 347 aaPredicted RBP9.98□□□□□ -0.81
CTSA-210ENST00000606000 DCKP27707 260 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 CAPGP40121 348 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 SCN1BQ07699 218 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 MIDNQ504T8 468 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 SPIN3Q5JUX0 258 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 OLFML2AQ68BL7 652 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 ZNF529Q6P280 563 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 RPL22L1Q6P5R6 122 aaKnown RBP9.98□□□□□ -0.81
CTSA-210ENST00000606000 SETD9Q8NE22 299 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 OR5D14Q8NGL3 314 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 OR10K1Q8NGX5 313 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 OR4F5Q8NH21 305 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 LINC01006Q8NI28 216 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 ZNF714Q96N38 554 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
CTSA-210ENST00000606000 SSX3Q99909 188 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 PPA2Q9H2U2 334 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
CTSA-210ENST00000606000 MMP24Q9Y5R2 645 aa9.98□□□□□ -0.81
CTSA-210ENST00000606000 PNMA8CA0A1B0GUJ8 204 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 BTBD17A6NE02 478 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 POM121CA8CG34 1229 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 ODF3BA8MYP8 253 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 HSPB6O14558 160 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 ATP6V1G2O95670 118 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 ARG1P05089 322 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 IGHV1-8P0DP01 117 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 ZNF44P15621 663 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 MYL12AP19105 171 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 RAB3AP20336 220 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 OR3A4PP47883 348 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 P2RX3P56373 397 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 DHRS7BQ6IAN0 325 aaPredicted RBP9.97□□□□□ -0.81
CTSA-210ENST00000606000 Q6P435 159 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 TMPRSS11AQ6ZMR5 421 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 GDPGP1Q6ZNW5 385 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 SATL1Q86VE3 508 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 C8orf59Q8N0T1 100 aaPredicted RBP9.97□□□□□ -0.81
CTSA-210ENST00000606000 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 GPR148Q8TDV2 347 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 TMEM106AQ96A25 262 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 COQ2Q96H96 371 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 TMEM80Q96HE8 168 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 FAM192AQ9GZU8 254 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 HEXA-AS1Q9H8Q6 139 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 SEBOXQ9HB31 216 aaPredicted RBP9.97□□□□□ -0.81
CTSA-210ENST00000606000 BEX1Q9HBH7 125 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 C8orf4Q9NR00 106 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 ZNF581Q9P0T4 197 aa9.97□□□□□ -0.81
CTSA-210ENST00000606000 EXOSC1Q9Y3B2 195 aaKnown RBP9.97□□□□□ -0.81
CTSA-210ENST00000606000 hCG_1809904A0A1W2PP81 198 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 A0A1W2PPE2 198 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 A0A1W2PR64 198 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 A0A1W2PRV1 198 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 hADV38S2A0JD32 116 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 IRGMA1A4Y4 181 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 CLPSL1A2RUU4 121 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 FAM172BPA6NC97 362 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 SLC33A1O00400 549 aaPredicted RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 MGST3O14880 152 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 OGG1O15527 345 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 CHST1O43916 411 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 GDNFP39905 211 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 GLIPR1P48060 266 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 MEF2CQ06413 473 aaPredicted RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 AESQ08117 197 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 ST3GAL4Q11206 333 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 ATXN7L3Q14CW9 347 aaPredicted RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 LRRC75BQ2VPJ9 315 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 CCDC58Q4VC31 144 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 UTF1Q5T230 341 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 PRAMEF5Q5TYX0 476 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 ZNF626Q68DY1 528 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 HIST2H2BDQ6DRA6 164 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 DMKNQ6E0U4 476 aaPredicted RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 AHSA2Q719I0 299 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 TRAPPC6BQ86SZ2 158 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 SAXO1Q8IYX7 474 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 ZSCAN4Q8NAM6 433 aaPredicted RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 OR52N1Q8NH53 320 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 SGMS2Q8NHU3 365 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 PPP1R35Q8TAP8 253 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 PIFOQ8TCI5 191 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 FBLIM1Q8WUP2 373 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 TNFAIP8L1Q8WVP5 186 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 SMIM19Q96E16 107 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 NR1H4Q96RI1 486 aaPredicted RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 GPER1Q99527 375 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 SLITRK2Q9H156 845 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 PPIL3Q9H2H8 161 aaKnown RBP9.96□□□□□ -0.82
CTSA-210ENST00000606000 BABAM2Q9NXR7 383 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 SIGLEC9Q9Y336 463 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 RNF114Q9Y508 228 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 LINC00312Q9Y6C7 94 aa9.96□□□□□ -0.82
CTSA-210ENST00000606000 A0A0G2JK05 382 aa9.95□□□□□ -0.82
CTSA-210ENST00000606000 FAM90A8PA6NJQ4 464 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms