RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	SF3B5	Q9BWJ5	86 aa	Known RBP	13.35	□□□□□ -0.27
CELF4-223	ENST00000603232	FBXL17	Q9UF56	701 aa		13.35	□□□□□ -0.27
CELF4-223	ENST00000603232	ZNF391	Q9UJN7	358 aa		13.35	□□□□□ -0.27
CELF4-223	ENST00000603232	KCNIP3	Q9Y2W7	256 aa		13.35	□□□□□ -0.27
CELF4-223	ENST00000603232	BSN	Q9UPA5	3926 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	SPEN	Q96T58	3664 aa	Known RBP	13.34	□□□□□ -0.27
CELF4-223	ENST00000603232		E5RGE8	158 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	UBE2C	O00762	179 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	FARS2	O95363	451 aa	Known RBP	13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	SEC11B	P0C7V7	166 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	OR5H8	P0DN80	308 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	RCC1	P18754	421 aa	Predicted RBP	13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	AGA	P20933	346 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	PTAFR	P25105	342 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	SOX8	P57073	446 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	SNRPE	P62304	92 aa	Known RBP	13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	OR2A2	Q6IF42	318 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	GALNTL5	Q7Z4T8	443 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	C20orf196	Q8IYI0	205 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	MAFIP	Q8WZ33	124 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	HIST1H2BA	Q96A08	127 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	SGK3	Q96BR1	496 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	ZNF385A	Q96PM9	386 aa	Known RBP	13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	SUCNR1	Q9BXA5	334 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	PRORY	Q9H606	182 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	NECAP2	Q9NVZ3	263 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	NSG2	Q9Y328	171 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	STARD10	Q9Y365	291 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	KPTN	Q9Y664	436 aa		13.34	□□□□□ -0.27
CELF4-223	ENST00000603232	NPIPA2	E9PIF3	369 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	NPIPA3	F8WFD2	350 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	MSTN	O14793	375 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	CEACAM4	O75871	244 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	SMIM6	P0DI80	62 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	PMEL	P40967	661 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	UCP3	P55916	312 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	TMEM33	P57088	247 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	RAB5B	P61020	215 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	RAB35	Q15286	201 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	CNN3	Q15417	329 aa	Known RBP	13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	GPR157	Q5UAW9	335 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	NPRL2	Q8WTW4	380 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	KIRREL1	Q96J84	757 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	SH2D2A	Q9NP31	389 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	IL36G	Q9NZH8	169 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	ATRX	P46100	2492 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	FAM87A	P0C7U9	286 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF44	P15621	663 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	NME2	P22392	152 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	TMEM187	Q14656	261 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	KRTAP27-1	Q3LI81	207 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	TMEM42	Q69YG0	159 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF100	Q8IYN0	542 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	ZIC4	Q8N9L1	334 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	PIGT	Q969N2	578 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	CLCC1	Q96S66	551 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	NAA60	Q9H7X0	242 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	TUBA4B	Q9H853	241 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	PLEK2	Q9NYT0	353 aa		13.33	□□□□□ -0.28
CELF4-223	ENST00000603232	LINC00587	B1AMM8	73 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232		H7C1Q1	480 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	ZIC3	O60481	467 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	S100A8	P05109	93 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	GLA	P06280	429 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	CHAT	P28329	748 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	RAB5C	P51148	216 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	SSR4	P51571	173 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	MTCP1	P56278	107 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	RAC1	P63000	192 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	FAM76B	Q5HYJ3	339 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	ABHD17B	Q5VST6	288 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	PRAMEF20	Q5VT98	475 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	ETV3L	Q6ZN32	361 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232		Q6ZRG5	221 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	LHFPL2	Q6ZUX7	228 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	GPR137C	Q8N3F9	429 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	NANP	Q8TBE9	248 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	MRPL24	Q96A35	216 aa	Known RBP	13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	FBXO17	Q96EF6	278 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	SULT4A1	Q9BR01	284 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	RBM24	Q9BX46	236 aa	Known RBP	13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	PROK2	Q9HC23	129 aa		13.32	□□□□□ -0.28
CELF4-223	ENST00000603232	SYNGR3	O43761	229 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	CST2	P09228	141 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	TMEM225B	P0DP42	221 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	GABRR1	P24046	479 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	CD80	P33681	288 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	PIGP	P57054	158 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	RBMS3	Q6XE24	437 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	GINS3	Q9BRX5	216 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	ULBP2	Q9BZM5	246 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	ELL3	Q9HB65	397 aa	Predicted RBP	13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	CACNA1B	Q00975	2339 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	GJE1	A6NN92	205 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	DANCR	P0C864	163 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF728	P0DKX0	622 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	LMO1	P25800	156 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	IL13RA2	Q14627	380 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	RSU1	Q15404	277 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms