RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ODF3BA8MYP8 253 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 PSPNO60542 156 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 RBP4P02753 201 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 PEX2P28328 305 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 MEF2CQ06413 473 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 DYNC1I2Q13409 638 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 HABP2Q14520 560 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 ZNF146Q15072 292 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 SPIN3Q5JUX0 258 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 LYG1Q8N1E2 194 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 OR52I1Q8NGK6 324 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 OR5D18Q8NGL1 313 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 FOXRED1Q96CU9 486 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 ZNF649Q9BS31 505 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 CDCA4Q9BXL8 241 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 ZNF702PQ9H963 129 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 SEBOXQ9HB31 216 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 INPP5EQ9NRR6 644 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 PLXNB1O43157 2135 aa17.11■□□□□ 0.33
PPFIA3-209ENST00000602783 IGKV1-12A0A0C4DH73 117 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 hADV38S2A0JD32 116 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 E9PI62 339 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 BAG2O95816 211 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 IGKV1D-12P01611 117 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 MT-ND2P03891 347 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 IGHV1-8P0DP01 117 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 BEAN1Q3B7T3 259 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 LDLRAD2Q5SZI1 272 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 ZNF626Q68DY1 528 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 TMEM219Q86XT9 240 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 OR11H6Q8NGC7 330 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 RPS4Y2Q8TD47 263 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 ZCCHC4Q9H5U6 513 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 NEK6Q9HC98 313 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 HMG20AQ9NP66 347 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 SERTAD4Q9NUC0 356 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 LINC00312Q9Y6C7 94 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 NOTCH3Q9UM47 2321 aa17.1■□□□□ 0.33
PPFIA3-209ENST00000602783 A6NDX4 124 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 SIRPB1O00241 398 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 KDM4BO94953 1096 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 ZFPL1O95159 310 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 OR3A1P47881 315 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 MRPL28Q13084 256 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 ZSCAN26Q16670 478 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 NSUN5P1Q3KNT7 163 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 OR4S1Q8NGB4 309 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 COMMD4Q9H0A8 199 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 EXOSC4Q9NPD3 245 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 SMPD3Q9NY59 655 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 GLS2Q9UI32 602 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 PITPNC1Q9UKF7 332 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 GSTK1Q9Y2Q3 226 aa17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 RPL36Q9Y3U8 105 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-209ENST00000602783 TMEM212A6NML5 194 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 MGST3O14880 152 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 FBXO24O75426 580 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 HCKP08631 526 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 CCDC159P0C7I6 412 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 CD28P10747 220 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 GBX2P52951 348 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 SAMD5Q5TGI4 173 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 Q8N2B8 174 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 ZNF555Q8NEP9 628 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 OR5AK2Q8NH90 309 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 TSEN15Q8WW01 171 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 PDCD1LG2Q9BQ51 273 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 PRSS22Q9GZN4 317 aa17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 MRPS18AQ9NVS2 196 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-209ENST00000602783 SULT1B1O43704 296 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 OR2H2O95918 312 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 P2RX3P56373 397 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 SMN1Q16637 294 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 KLHL22Q53GT1 634 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 TRAPPC6BQ86SZ2 158 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 STMN2Q93045 179 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 RDH12Q96NR8 316 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 DHDHQ9UQ10 334 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 HILPDAQ9Y5L2 63 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 SESN1Q9Y6P5 492 aa17.07■□□□□ 0.32
PPFIA3-209ENST00000602783 SH2D1BO14796 132 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 PEX14O75381 377 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 WBP4O75554 376 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 PRB2P02812 416 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 RPSAP08865 295 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 LIMS3P0CW19 117 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 LIMS4P0CW20 117 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 JUNBP17275 347 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 ERP29P30040 261 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 EMX1Q04741 257 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 SERPINA12Q8IW75 414 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 SAXO1Q8IYX7 474 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 PARP16Q8N5Y8 322 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 OR5M11Q96RB7 305 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 FGF20Q9NP95 211 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 PCDHGB5Q9Y5G0 923 aa17.06■□□□□ 0.32
PPFIA3-209ENST00000602783 DYNLT3P51808 116 aa17.05■□□□□ 0.32
PPFIA3-209ENST00000602783 GTF2A1P52655 376 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-209ENST00000602783 ZP1P60852 638 aa17.05■□□□□ 0.32
PPFIA3-209ENST00000602783 SLC34A1Q06495 639 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms