RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RFT1Q96AA3 541 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 FGGYQ96C11 551 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 NOTCH3Q9UM47 2321 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 UBE2J1Q9Y385 318 aaPredicted RBP10.54□□□□□ -0.72
RPS28-204ENST00000602140 TRGV10A0A0A0MS01 117 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 FAM172BPA6NC97 362 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 SH2D1BO14796 132 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 ZNF20P17024 532 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 ATF1P18846 271 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 CDK2P24941 298 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 CDC42P60953 191 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 PDZK1IP1Q13113 114 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 SPIN3Q5JUX0 258 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 FOXB2Q5VYV0 432 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 OR52W1Q6IF63 320 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 LHFPL2Q6ZUX7 228 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 UTS2BQ765I0 119 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 C16orf82Q7Z2V1 217 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 CENPVQ7Z7K6 275 aaPredicted RBP10.53□□□□□ -0.72
RPS28-204ENST00000602140 STMN2Q93045 179 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 AKR1E2Q96JD6 320 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 GABARAPL3Q9BY60 117 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
RPS28-204ENST00000602140 FRRS1LQ9P0K9 344 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 GSTK1Q9Y2Q3 226 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 ZNF281Q9Y2X9 895 aa10.53□□□□□ -0.72
RPS28-204ENST00000602140 IGKV1-12A0A0C4DH73 117 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 OR2H2O95918 312 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 IGKV1D-12P01611 117 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 OCM2P0CE71 109 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 OCMP0CE72 109 aaPredicted RBP10.52□□□□□ -0.73
RPS28-204ENST00000602140 PF4V1P10720 104 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 FCGR1AP12314 374 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 IGLL1P15814 213 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 BRS3P32247 399 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 GLIPR1P48060 266 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 BDH1Q02338 343 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 AESQ08117 197 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 BNIP1Q12981 228 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 ABCA11PQ4W5N1 156 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 TCTEX1D4Q5JR98 221 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 HEPN1Q6WQI6 88 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 CCDC121Q6ZUS5 278 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 RTN4RL2Q86UN3 420 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 ZNF596Q8TC21 504 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 CAPSLQ8WWF8 208 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 CORO2AQ92828 525 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 SPSB1Q96BD6 273 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 OPALINQ96PE5 141 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 SPACA5Q96QH8 159 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 SLC25A33Q9BSK2 321 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 LIN7BQ9HAP6 207 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 OAZ3Q9UMX2 235 aa10.52□□□□□ -0.73
RPS28-204ENST00000602140 TCRBV4S1A1TA0A5B7 111 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 FUOMA2VDF0 154 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 LEUTXA8MZ59 168 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 ISG15P05161 165 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 LPLP06858 475 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 ZNF44P15621 663 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 GDNFP39905 211 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 ARHGDIBP52566 201 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 NANOS3P60323 173 aaKnown RBP10.51□□□□□ -0.73
RPS28-204ENST00000602140 SCN1BQ07699 218 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 KPNB1Q14974 876 aaKnown RBP10.51□□□□□ -0.73
RPS28-204ENST00000602140 RNF144BQ7Z419 303 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 KCTD20Q7Z5Y7 419 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 OR5D18Q8NGL1 313 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 OR10AC1Q8NH08 325 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 MBOAT4Q96T53 435 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 OSBPL10Q9BXB5 764 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 ZNF286AQ9HBT8 521 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 ING3Q9NXR8 418 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 TAS2R3Q9NYW6 316 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 PCDHGB5Q9Y5G0 923 aa10.51□□□□□ -0.73
RPS28-204ENST00000602140 DAPL1A0PJW8 107 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 SH2D7A6NKC9 451 aaPredicted RBP10.5□□□□□ -0.73
RPS28-204ENST00000602140 SAC3D1A6NKF1 404 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 TOR1AO14656 332 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 KDM4BO94953 1096 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 PF4P02776 101 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 HTR1AP08908 422 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 LMO1P25800 156 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 CD34P28906 385 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 FDX2Q6P4F2 183 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 OR51A4Q8NGJ6 313 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 OR13C3Q8NGS6 347 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 OR13C9Q8NGT0 318 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 MYDGFQ969H8 173 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 RNFT2Q96EX2 444 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 CENPNQ96H22 339 aaPredicted RBP10.5□□□□□ -0.73
RPS28-204ENST00000602140 RBM14Q96PK6 669 aaKnown RBP10.5□□□□□ -0.73
RPS28-204ENST00000602140 COMMD4Q9H0A8 199 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 NEK6Q9HC98 313 aa10.5□□□□□ -0.73
RPS28-204ENST00000602140 IMPAD1Q9NX62 359 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms