RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 CAPSLQ8WWF8 208 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 HRASLS5Q96KN8 279 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 C4orf36Q96KX1 117 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 TMEM133Q9H2Q1 129 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 HMG20AQ9NP66 347 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 SERTAD4Q9NUC0 356 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 UBE2J1Q9Y385 318 aaPredicted RBP7.9□□□□□ -1.14
VRK3-216ENST00000599342 MEGF11A6BM72 1044 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 G3V4G9 280 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 XPNPEP2O43895 674 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 OR2H2O95918 312 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 HCKP08631 526 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 CD28P10747 220 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 ZNF44P15621 663 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 HTR1DP28221 377 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 ALDH3A2P51648 485 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 CCR9P51686 369 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 NANOS3P60323 173 aaKnown RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 SNRPGP62308 76 aaKnown RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 EMX1Q04741 257 aaPredicted RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 ALKBH1Q13686 389 aaKnown RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 KPNB1Q14974 876 aaKnown RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 ZIK1Q3SY52 487 aaPredicted RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 SLC25A30Q5SVS4 291 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 LDLRAD2Q5SZI1 272 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 PRAMEF5Q5TYX0 476 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 ZFP1Q6P2D0 407 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 RTN4RL2Q86UN3 420 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 NDUFA11Q86Y39 141 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 OR4F17Q8NGA8 305 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 OR5D18Q8NGL1 313 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 OR13C9Q8NGT0 318 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 ZNF596Q8TC21 504 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
VRK3-216ENST00000599342 AKR1E2Q96JD6 320 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 SPACA5Q96QH8 159 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 OR4F4Q96R69 305 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 OR5M11Q96RB7 305 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 RHOFQ9HBH0 211 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 GMPPBQ9Y5P6 360 aa7.89□□□□□ -1.15
VRK3-216ENST00000599342 J3QRE1 110 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 KDM4BO94953 1096 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 MT-ND2P03891 347 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 RPSAP08865 295 aaKnown RBP7.88□□□□□ -1.15
VRK3-216ENST00000599342 CDK2P24941 298 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 BRS3P32247 399 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 PTGFRP43088 359 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 SCN1BQ07699 218 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 BEAN1Q3B7T3 259 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 C16orf82Q7Z2V1 217 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 SAXO1Q8IYX7 474 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 ABHD12Q8N2K0 398 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 CHST4Q8NCG5 386 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 OR4D6Q8NGJ1 314 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 OR51A4Q8NGJ6 313 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 OR4P4Q8NGL7 312 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 OR10AC1Q8NH08 325 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 TSEN15Q8WW01 171 aaKnown RBP7.88□□□□□ -1.15
VRK3-216ENST00000599342 STMN2Q93045 179 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 R3HDM4Q96D70 268 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 PELI1Q96FA3 418 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 CPNE2Q96FN4 548 aaPredicted RBP7.88□□□□□ -1.15
VRK3-216ENST00000599342 ALG8Q9BVK2 526 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 COMMD4Q9H0A8 199 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 ZCCHC4Q9H5U6 513 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 ING3Q9NXR8 418 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 TAS2R3Q9NYW6 316 aa7.88□□□□□ -1.15
VRK3-216ENST00000599342 EXOGQ9Y2C4 368 aaKnown RBP7.88□□□□□ -1.15
VRK3-216ENST00000599342 WNK1Q9H4A3 2382 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 IGKV1-12A0A0C4DH73 117 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 ODAMA1E959 279 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 FAM172BPA6NC97 362 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 TMEM212A6NML5 194 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 OR4C45A6NMZ5 311 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 LEUTXA8MZ59 168 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 TOR1AO14656 332 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 SULT1B1O43704 296 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 MPZL2O60487 215 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 MMP23AO75900 390 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 FADS2O95864 444 aaKnown RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 IGKV1D-12P01611 117 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 CSN2P05814 226 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 CCDC159P0C7I6 412 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 TMEM225BP0DP42 221 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 DBTP11182 482 aaKnown RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 JUNBP17275 347 aaPredicted RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 LMO1P25800 156 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 CEACAM3P40198 252 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 GLIPR1P48060 266 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 BLCAPP62952 87 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 AESQ08117 197 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 MRPL28Q13084 256 aaKnown RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 GALEQ14376 348 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 ATXN7L3Q14CW9 347 aaPredicted RBP7.87□□□□□ -1.15
VRK3-216ENST00000599342 KRBOX4Q5JUW0 171 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 HEPN1Q6WQI6 88 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
VRK3-216ENST00000599342 LHFPL3Q86UP9 236 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms