RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 GPR148Q8TDV2 347 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 CYGBQ8WWM9 190 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 CORO2AQ92828 525 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 RFT1Q96AA3 541 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 MALSU1Q96EH3 234 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF714Q96N38 554 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 SPACA5Q96QH8 159 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 CITED1Q99966 193 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 EXOSC4Q9NPD3 245 aaKnown RBP8.54□□□□□ -1.04
CCDC9-203ENST00000596938 DIMT1Q9UNQ2 313 aaKnown RBP8.54□□□□□ -1.04
CCDC9-203ENST00000596938 GSTK1Q9Y2Q3 226 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 EXOSC1Q9Y3B2 195 aaKnown RBP8.54□□□□□ -1.04
CCDC9-203ENST00000596938 TBL2Q9Y4P3 447 aaKnown RBP8.54□□□□□ -1.04
CCDC9-203ENST00000596938 HSPE1-MOB4S4R3N1 261 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 FUOMA2VDF0 154 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 H3BUX3 64 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CLIC3O95833 236 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 OR2H2O95918 312 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 ALDOBP05062 364 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CD2P06729 351 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 HCKP08631 526 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 TMEM225BP0DP42 221 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CALCBP10092 127 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 RAB3AP20336 220 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 COX7A1P24310 79 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 OR3A1P47881 315 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 BMXP51813 675 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 P2RX3P56373 397 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 SRSF4Q08170 494 aaKnown RBP8.53□□□□□ -1.04
CCDC9-203ENST00000596938 MED21Q13503 144 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CDK5R1Q15078 307 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 RCN1Q15293 331 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 OR2G6Q5TZ20 316 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF626Q68DY1 528 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 ELP2Q6IA86 826 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 SLC35E4Q6ICL7 350 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 Q6P435 159 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF782Q6ZMW2 699 aaPredicted RBP8.53□□□□□ -1.04
CCDC9-203ENST00000596938 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 TCF23Q7RTU1 214 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 DTX3Q8N9I9 347 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CHST4Q8NCG5 386 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 Q8NFD4 153 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 PXT1Q8NFP0 134 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 OR5D18Q8NGL1 313 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CNIH3Q8TBE1 160 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 TSEN15Q8WW01 171 aaKnown RBP8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CPNE2Q96FN4 548 aaPredicted RBP8.53□□□□□ -1.04
CCDC9-203ENST00000596938 TMEM80Q96HE8 168 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CDCA4Q9BXL8 241 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CHST6Q9GZX3 395 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 RAB18Q9NP72 206 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CHCHD3Q9NX63 227 aaKnown RBP8.53□□□□□ -1.04
CCDC9-203ENST00000596938 FBLN5Q9UBX5 448 aa8.53□□□□□ -1.04
CCDC9-203ENST00000596938 UBE2J1Q9Y385 318 aaPredicted RBP8.53□□□□□ -1.04
CCDC9-203ENST00000596938 CASQ2O14958 399 aaPredicted RBP8.52□□□□□ -1.05
CCDC9-203ENST00000596938 DEGS1O15121 323 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 MAGEB3O15480 346 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 ARG1P05089 322 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 CSN2P05814 226 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 MYL12AP19105 171 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 KIR2DS4P43632 304 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 MTNR1BP49286 362 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 SNU13P55769 128 aaKnown RBP8.52□□□□□ -1.05
CCDC9-203ENST00000596938 KRTAP10-3P60369 221 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 OGFRL1Q5TC84 451 aaPredicted RBP8.52□□□□□ -1.05
CCDC9-203ENST00000596938 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 XAF1Q6GPH4 301 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 ASPHD2Q6ICH7 369 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 TREML4Q6UXN2 200 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 ASCL4Q6XD76 172 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 LHFPL4Q7Z7J7 247 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 TPRX1Q8N7U7 411 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 ZNF485Q8NCK3 441 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 OR52N1Q8NH53 320 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 RGP1Q92546 391 aaPredicted RBP8.52□□□□□ -1.05
CCDC9-203ENST00000596938 GGHQ92820 318 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 FOXRED1Q96CU9 486 aaPredicted RBP8.52□□□□□ -1.05
CCDC9-203ENST00000596938 SMIM19Q96E16 107 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 TMEM133Q9H2Q1 129 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 PPA2Q9H2U2 334 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 TAS2R3Q9NYW6 316 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 CLEC2DQ9UHP7 191 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 ZNF281Q9Y2X9 895 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 SIRT4Q9Y6E7 314 aaPredicted RBP8.52□□□□□ -1.05
CCDC9-203ENST00000596938 SESN1Q9Y6P5 492 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
CCDC9-203ENST00000596938 CMYA5Q8N3K9 4069 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 TRGV10A0A0A0MS01 117 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
CCDC9-203ENST00000596938 EFCAB10A6NFE3 127 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 SIRPB1O00241 398 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 SLC33A1O00400 549 aaPredicted RBP8.51□□□□□ -1.05
CCDC9-203ENST00000596938 ZNF44P15621 663 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 PAX6P26367 422 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 CAPGP40121 348 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 GLIPR1P48060 266 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms