RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 IL36RNQ9UBH0 155 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 CTSZQ9UBR2 303 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 ZNF222Q9UK12 451 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 FAM157AC9JC47 383 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 HTR3BO95264 441 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 PRDX2P32119 198 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 SDC2P34741 201 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 GABRA2P47869 451 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 OR10A3P58181 314 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 FGF12P61328 243 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.42
DDX49-204ENST00000595858 SLC22A6Q4U2R8 563 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 FAM166AQ6J272 317 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 SLC36A1Q7Z2H8 476 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 CD177Q8N6Q3 437 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 OR8B3Q8NGG8 313 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 OR6F1Q8NGZ6 308 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 ZNF486Q96H40 463 aaPredicted RBP12.46□□□□□ -0.42
DDX49-204ENST00000595858 C1orf159Q96HA4 380 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.42
DDX49-204ENST00000595858 OR8B2Q96RD0 313 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 OR14J1Q9UGF5 321 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 ZNF221Q9UK13 617 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 MALRD1Q5VYJ5 2156 aa12.46□□□□□ -0.42
DDX49-204ENST00000595858 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 A0A1B0GW55 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 FABP12A6NFH5 140 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 SLC17A2O00624 439 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 RGS13O14921 159 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 ZNF780AO75290 641 aaPredicted RBP12.45□□□□□ -0.42
DDX49-204ENST00000595858 CSTBP04080 98 aaKnown RBP12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L2P0CJ85 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L3P0CJ86 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L4P0CJ87 422 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L5P0CJ88 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L6P0CJ89 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L7P0CJ90 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 IGHV4-31P0DP07 118 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 FOSL1P15407 271 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 HTR2CP28335 458 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUSP1P28562 367 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 GPR176Q14439 515 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 ZNF146Q15072 292 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 BAK1Q16611 211 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 RSBN1Q5VWQ0 802 aaPredicted RBP12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4L9Q6RFH8 374 aaPredicted RBP12.45□□□□□ -0.42
DDX49-204ENST00000595858 METAP1DQ6UB28 335 aaPredicted RBP12.45□□□□□ -0.42
DDX49-204ENST00000595858 FIP1L1Q6UN15 594 aaKnown RBP12.45□□□□□ -0.42
DDX49-204ENST00000595858 FAM131AQ6UXB0 335 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 ZNF841Q6ZN19 808 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 NR2C2APQ86WQ0 139 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 FAM216BQ8N7L0 139 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 OR6M1Q8NGM8 313 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 SDSLQ96GA7 329 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 MED30Q96HR3 178 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 GAFA1Q96PS6 74 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 PCDHB16Q9NRJ7 776 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 GHRLQ9UBU3 117 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 DUX4Q9UBX2 424 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 ABCA1O95477 2261 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 CELSR1Q9NYQ6 3014 aa12.45□□□□□ -0.42
DDX49-204ENST00000595858 NKX6-3A6NJ46 265 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SIGLEC5O15389 551 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 GSTT2P0CG29 244 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 GSTT2BP0CG30 244 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SERPINA2P20848 420 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 S100A1P23297 94 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 RFX2P48378 723 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 PITPNBP48739 271 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
DDX49-204ENST00000595858 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
DDX49-204ENST00000595858 MXD1Q05195 221 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 ESCO2Q56NI9 601 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SPIN3Q5JUX0 258 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 OR51T1Q8NGJ9 327 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SLC25A28Q96A46 364 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 DIRAS2Q96HU8 199 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 MIXL1Q9H2W2 232 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SEBOXQ9HB31 216 aaPredicted RBP12.44□□□□□ -0.42
DDX49-204ENST00000595858 MAB21L2Q9Y586 359 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 A0A1W2PP11 408 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 A0A1W2PQ09 198 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SMIM30A4D0T7 59 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 B4DSR2 109 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 FCN3O75636 299 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 UBBP0CG47 229 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 SELLP14151 372 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 GZMKP49863 264 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 IL13RA1P78552 427 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 WDR25Q64LD2 544 aaPredicted RBP12.44□□□□□ -0.42
DDX49-204ENST00000595858 ZNRF1Q8ND25 227 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 MSI2Q96DH6 328 aaKnown RBP12.44□□□□□ -0.42
DDX49-204ENST00000595858 SSBP3Q9BWW4 388 aaPredicted RBP12.44□□□□□ -0.42
DDX49-204ENST00000595858 GLS2Q9UI32 602 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
DDX49-204ENST00000595858 HIVEP1P15822 2718 aa12.43□□□□□ -0.42
DDX49-204ENST00000595858 DOCK11Q5JSL3 2073 aa12.43□□□□□ -0.42
DDX49-204ENST00000595858 A0A0G2JK05 382 aa12.43□□□□□ -0.42
DDX49-204ENST00000595858 HMX3A6NHT5 357 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms