RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 IL13RA2Q14627 380 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 PDCD1Q15116 288 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 KRTAP21-3Q3LHN1 58 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 GLT8D1Q68CQ7 371 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 TMEM91Q6ZNR0 172 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 NDUFB11Q9NX14 153 aa21.25■□□□□ 0.99
TRIM28-204ENST00000594806 M0R1W7 72 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 CCRL2O00421 344 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 EPHA1P21709 976 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 GALP22466 123 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 FPR2P25090 351 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 GP2P55259 537 aaKnown RBP21.24■□□□□ 0.99
TRIM28-204ENST00000594806 BLMHQ13867 455 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 NHLRC3Q5JS37 347 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 GDPD3Q7L5L3 318 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 LYPD6Q86Y78 171 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 GHRLQ9UBU3 117 aa21.24■□□□□ 0.99
TRIM28-204ENST00000594806 CDRT1O95170 752 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 HTR3BO95264 441 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 TNFAIP8O95379 198 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 OR2H2O95918 312 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 CALCBP10092 127 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 GABRR1P24046 479 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 DUSP1P28562 367 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 SSX1Q16384 188 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 FAM27D1Q5T7N8 215 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 C17orf107Q6ZR85 190 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 LRRTM1Q86UE6 522 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 MRPS24Q96EL2 167 aaKnown RBP21.23■□□□□ 0.99
TRIM28-204ENST00000594806 PCGF1Q9BSM1 259 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 ONECUT1Q9UBC0 465 aa21.23■□□□□ 0.99
TRIM28-204ENST00000594806 MRPS28Q9Y2Q9 187 aaKnown RBP21.23■□□□□ 0.99
TRIM28-204ENST00000594806 DSCAML1Q8TD84 2053 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 TMEM82A0PJX8 343 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 MGST3O14880 152 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 DEGS1O15121 323 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 CD37P11049 281 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 ZNF44P15621 663 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 RANBP1P43487 201 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 SNU13P55769 128 aaKnown RBP21.22■□□□□ 0.99
TRIM28-204ENST00000594806 FABP5Q01469 135 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 KLF17Q5JT82 389 aaPredicted RBP21.22■□□□□ 0.99
TRIM28-204ENST00000594806 GPR157Q5UAW9 335 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 Q6P435 159 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 LINC00596Q86U02 117 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 PRIMA1Q86XR5 153 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 FAM185AQ8N0U4 392 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 MUL1Q969V5 352 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 TBX15Q96SF7 602 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 SVEP1Q4LDE5 3571 aa21.22■□□□□ 0.99
TRIM28-204ENST00000594806 FUOMA2VDF0 154 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 PSPNO60542 156 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 GTF2F2P13984 249 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 PSMB9P28065 219 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 ERP29P30040 261 aaKnown RBP21.21■□□□□ 0.99
TRIM28-204ENST00000594806 MEF2CQ06413 473 aaPredicted RBP21.21■□□□□ 0.99
TRIM28-204ENST00000594806 GRK1Q15835 563 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 AWAT2Q6E213 333 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 CD200R1LQ6Q8B3 271 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 METAP1DQ6UB28 335 aaPredicted RBP21.21■□□□□ 0.99
TRIM28-204ENST00000594806 OSR2Q8N2R0 312 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 OR10K1Q8NGX5 313 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 PPIL3Q9H2H8 161 aaKnown RBP21.21■□□□□ 0.99
TRIM28-204ENST00000594806 C19orf12Q9NSK7 152 aa21.21■□□□□ 0.99
TRIM28-204ENST00000594806 A0A0A6YYJ9 748 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 A0A0G2JK05 382 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 TRDV1A0A1B0GX56 115 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 hCG_1809904A0A1W2PP81 198 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 A0A1W2PPE2 198 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 A0A1W2PR64 198 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 A0A1W2PRV1 198 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 CSN2P05814 226 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 UBBP0CG47 229 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 PSMD7P51665 324 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 SLC22A6Q4U2R8 563 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 GLIPR1L1Q6UWM5 242 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 C9orf139Q6ZV77 190 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 IFT22Q9H7X7 185 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 METTL8Q9H825 291 aaKnown RBP21.2■□□□□ 0.98
TRIM28-204ENST00000594806 UNKLQ9H9P5 680 aaKnown RBP21.2■□□□□ 0.98
TRIM28-204ENST00000594806 ST3GAL6Q9Y274 331 aa21.2■□□□□ 0.98
TRIM28-204ENST00000594806 TRAV40A0A0B4J280 105 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 SIRPB1O00241 398 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 SERPINA2P20848 420 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 EDDM3BP56851 147 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 SCN1BQ07699 218 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 C1orf100Q5SVJ3 147 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 SYT6Q5T7P8 510 aaPredicted RBP21.19■□□□□ 0.98
TRIM28-204ENST00000594806 TMEM200BQ69YZ2 307 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 USP43Q70EL4 1123 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 BPIFB2Q8N4F0 458 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 OR4S1Q8NGB4 309 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 OR4D6Q8NGJ1 314 aa21.19■□□□□ 0.98
TRIM28-204ENST00000594806 ZNF418Q8TF45 676 aaPredicted RBP21.19■□□□□ 0.98
TRIM28-204ENST00000594806 NR1H4Q96RI1 486 aaPredicted RBP21.19■□□□□ 0.98
TRIM28-204ENST00000594806 NKX3-1Q99801 234 aaPredicted RBP21.19■□□□□ 0.98
TRIM28-204ENST00000594806 MS4A7Q9GZW8 240 aaPredicted RBP21.19■□□□□ 0.98
TRIM28-204ENST00000594806 MXRA5Q9NR99 2828 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 A0A087WXM4 84 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 hADV38S2A0JD32 116 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms