RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 OR11H6Q8NGC7 330 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 OR13C9Q8NGT0 318 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 PPP1R35Q8TAP8 253 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 PIFOQ8TCI5 191 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 APH1BQ8WW43 257 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 RFT1Q96AA3 541 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 ZNF714Q96N38 554 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 CHST6Q9GZX3 395 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 HMG20AQ9NP66 347 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 MRPS18AQ9NVS2 196 aaKnown RBP10.68□□□□□ -0.7
H3F3B-213ENST00000593254 FBLN5Q9UBX5 448 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 TBL2Q9Y4P3 447 aaKnown RBP10.68□□□□□ -0.7
H3F3B-213ENST00000593254 LINC00312Q9Y6C7 94 aa10.68□□□□□ -0.7
H3F3B-213ENST00000593254 MEGF11A6BM72 1044 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 TMEM212A6NML5 194 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 MGST3O14880 152 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 KDM4BO94953 1096 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 ZFPL1O95159 310 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 RPSAP08865 295 aaKnown RBP10.67□□□□□ -0.7
H3F3B-213ENST00000593254 OCM2P0CE71 109 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 OCMP0CE72 109 aaPredicted RBP10.67□□□□□ -0.7
H3F3B-213ENST00000593254 GABRR1P24046 479 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 DUSP1P28562 367 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 GABRA5P31644 462 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 OR3A1P47881 315 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 MRPL28Q13084 256 aaKnown RBP10.67□□□□□ -0.7
H3F3B-213ENST00000593254 LDLRAD2Q5SZI1 272 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 LIAT1Q6ZQX7 453 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 DYNAPQ8N1N2 210 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 TPRX1Q8N7U7 411 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 OR4S1Q8NGB4 309 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 OR52I1Q8NGK6 324 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 FOXRED1Q96CU9 486 aaPredicted RBP10.67□□□□□ -0.7
H3F3B-213ENST00000593254 RDH12Q96NR8 316 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 SPACA5Q96QH8 159 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 ZCCHC4Q9H5U6 513 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 RANBP3Q9H6Z4 567 aaPredicted RBP10.67□□□□□ -0.7
H3F3B-213ENST00000593254 RHOFQ9HBH0 211 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 RAB18Q9NP72 206 aa10.67□□□□□ -0.7
H3F3B-213ENST00000593254 RPL36Q9Y3U8 105 aaKnown RBP10.67□□□□□ -0.7
H3F3B-213ENST00000593254 E9PI62 339 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 WBP4O75554 376 aaKnown RBP10.66□□□□□ -0.7
H3F3B-213ENST00000593254 OPN1MWP04001 364 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 ARG1P05089 322 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 CSF1P09603 554 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 OPN1MW2P0DN77 364 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 OPN1MW3P0DN78 364 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 CALCBP10092 127 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 ERP29P30040 261 aaKnown RBP10.66□□□□□ -0.7
H3F3B-213ENST00000593254 KIR2DS4P43632 304 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 EFNB2P52799 333 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 SNU13P55769 128 aaKnown RBP10.66□□□□□ -0.7
H3F3B-213ENST00000593254 SAXO1Q8IYX7 474 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 PARP16Q8N5Y8 322 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 OR5D18Q8NGL1 313 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 OR5AK2Q8NH90 309 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 HAVCR2Q8TDQ0 301 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 MALSU1Q96EH3 234 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 PDCD1LG2Q9BQ51 273 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 JAM3Q9BX67 310 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 COMMD4Q9H0A8 199 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 DCLRE1BQ9H816 532 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 NEK6Q9HC98 313 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.66□□□□□ -0.7
H3F3B-213ENST00000593254 GLS2Q9UI32 602 aa10.66□□□□□ -0.7
H3F3B-213ENST00000593254 SIRPB1O00241 398 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 SH2D1BO14796 132 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 SULT1B1O43704 296 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 CHST1O43916 411 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 OR2H2O95918 312 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 CCDC159P0C7I6 412 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 LIMS3P0CW19 117 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 LIMS4P0CW20 117 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 LMO1P25800 156 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 P2RX3P56373 397 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 ZP1P60852 638 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 FAM189A2Q15884 450 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 KLHL22Q53GT1 634 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 LPCAT4Q643R3 524 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 C11orf88Q6PI97 169 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 OR5D14Q8NGL3 314 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 OR4C13Q8NGP0 309 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 CDCA4Q9BXL8 241 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 FGF20Q9NP95 211 aaPredicted RBP10.65□□□□□ -0.7
H3F3B-213ENST00000593254 EXOSC4Q9NPD3 245 aaKnown RBP10.65□□□□□ -0.7
H3F3B-213ENST00000593254 SMPD3Q9NY59 655 aaPredicted RBP10.65□□□□□ -0.7
H3F3B-213ENST00000593254 GSTK1Q9Y2Q3 226 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 SIGLEC9Q9Y336 463 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 UBE2J1Q9Y385 318 aaPredicted RBP10.65□□□□□ -0.7
H3F3B-213ENST00000593254 SESN1Q9Y6P5 492 aa10.65□□□□□ -0.7
H3F3B-213ENST00000593254 IGHV2-26A0A0B4J1V2 119 aa10.64□□□□□ -0.71
H3F3B-213ENST00000593254 BAG2O95816 211 aa10.64□□□□□ -0.71
H3F3B-213ENST00000593254 CSN2P05814 226 aa10.64□□□□□ -0.71
H3F3B-213ENST00000593254 GBX2P52951 348 aaPredicted RBP10.64□□□□□ -0.71
H3F3B-213ENST00000593254 DYNC1I2Q13409 638 aaKnown RBP10.64□□□□□ -0.71
H3F3B-213ENST00000593254 KISS1Q15726 138 aa10.64□□□□□ -0.71
H3F3B-213ENST00000593254 SSX2Q16385 188 aa10.64□□□□□ -0.71
H3F3B-213ENST00000593254 SMN1Q16637 294 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms