RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TXNL4BQ9NX01 149 aaKnown RBP12.36□□□□□ -0.43
DDX39A-221ENST00000593026 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 CDC42EP3Q9UKI2 254 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 AK6Q9Y3D8 172 aaKnown RBP12.36□□□□□ -0.43
DDX39A-221ENST00000593026 AUP1Q9Y679 476 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 NSD1Q96L73 2696 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-221ENST00000593026 K7N7A8 449 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 SIRPB1O00241 398 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 OR2H2O95918 312 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 LIPFP07098 398 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 CD37P11049 281 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 GTF2F2P13984 249 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 GABRR1P24046 479 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 HTR2CP28335 458 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 RBM11P57052 281 aaKnown RBP12.35□□□□□ -0.43
DDX39A-221ENST00000593026 IL13RA2Q14627 380 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 PIGYQ3MUY2 71 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 OR8H2Q8N162 312 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 CHST4Q8NCG5 386 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 OR6M1Q8NGM8 313 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 GFI1Q99684 422 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 BEX2Q9BXY8 128 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 MRPS26Q9BYN8 205 aaKnown RBP12.35□□□□□ -0.43
DDX39A-221ENST00000593026 PLGRKTQ9HBL7 147 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 GHRLQ9UBU3 117 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 ST3GAL6Q9Y274 331 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 V9GY05 133 aa12.35□□□□□ -0.43
DDX39A-221ENST00000593026 NIPBLQ6KC79 2804 aaeCLIP12.34□□□□□ -0.43
DDX39A-221ENST00000593026 TRBV23-1A0A0A0MS06 115 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 LOC100506127A0A0U1RQW1 187 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 A0A1W2PP11 408 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 A0A1W2PQ09 198 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 TMEM82A0PJX8 343 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 DEGS1O15121 323 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 SLC22A1O15245 554 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 PSPNO60542 156 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 CRLF1O75462 422 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 UBBP0CG47 229 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 PPIAL4GP0DN37 164 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 PSMD7P51665 324 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 PAX8Q06710 450 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 PDCD1Q15116 288 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 TIMM50Q3ZCQ8 353 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 NHLRC3Q5JS37 347 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 Q6P435 159 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 C17orf107Q6ZR85 190 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 GDPD3Q7L5L3 318 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 TEX29Q8N6K0 151 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 LY6G5BQ8NDX9 201 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 OR5D13Q8NGL4 314 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 PPP1R35Q8TAP8 253 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 C1orf147Q96MC9 270 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-221ENST00000593026 CHST6Q9GZX3 395 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 OPN4Q9UHM6 478 aa12.34□□□□□ -0.43
DDX39A-221ENST00000593026 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.43
DDX39A-221ENST00000593026 A0A0G2JK05 382 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 SHISA3A0PJX4 238 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 SLC17A2O00624 439 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 CRTAPO75718 401 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-221ENST00000593026 AVPP01185 164 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 MGMTP16455 207 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 HOXB4P17483 251 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-221ENST00000593026 RAB3BP20337 219 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 LMO1P25800 156 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 SRP14P37108 136 aaKnown RBP12.33□□□□□ -0.44
DDX39A-221ENST00000593026 EDDM3BP56851 147 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 EDDM3AQ14507 147 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 GRK1Q15835 563 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 RAB11BQ15907 218 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 C1orf229Q6ZS94 237 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-221ENST00000593026 LINC00596Q86U02 117 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 FAM185AQ8N0U4 392 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 OR4S1Q8NGB4 309 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 YIPF6Q96EC8 236 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 MRPS24Q96EL2 167 aaKnown RBP12.33□□□□□ -0.44
DDX39A-221ENST00000593026 DMRTB1Q96MA1 342 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 KCTD7Q96MP8 289 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 CST11Q9H112 138 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 PPA2Q9H2U2 334 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 BANF2Q9H503 90 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 ONECUT1Q9UBC0 465 aa12.33□□□□□ -0.44
DDX39A-221ENST00000593026 WNK2Q9Y3S1 2297 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
DDX39A-221ENST00000593026 SLC33A1O00400 549 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-221ENST00000593026 MGST3O14880 152 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
DDX39A-221ENST00000593026 OR7C1O76099 320 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-221ENST00000593026 BPNT1O95861 308 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 RANBP1P43487 201 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 OR3A1P47881 315 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
DDX39A-221ENST00000593026 P2RY14Q15391 338 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
DDX39A-221ENST00000593026 METTL11BQ5VVY1 283 aa12.32□□□□□ -0.44
DDX39A-221ENST00000593026 GDPGP1Q6ZNW5 385 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms