RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CYGBQ8WWM9 190 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 RGP1Q92546 391 aaPredicted RBP11.26□□□□□ -0.61
APOC1-208ENST00000592535 C16orf95Q9H693 158 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 NEK6Q9HC98 313 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 EXOSC4Q9NPD3 245 aaKnown RBP11.26□□□□□ -0.61
APOC1-208ENST00000592535 GLS2Q9UI32 602 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 ODF3BA8MYP8 253 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 SH2D1BO14796 132 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 MGST3O14880 152 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 CASQ2O14958 399 aaPredicted RBP11.25□□□□□ -0.61
APOC1-208ENST00000592535 ALX3O95076 343 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 OR2H2O95918 312 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 RBP4P02753 201 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 ARG1P05089 322 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
APOC1-208ENST00000592535 SOX2P48431 317 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 ZP1P60852 638 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 KISS1Q15726 138 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 AANATQ16613 207 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 SLC35E4Q6ICL7 350 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 TREML4Q6UXN2 200 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 OR13D1Q8NGV5 346 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 PPP1R35Q8TAP8 253 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 HAVCR2Q8TDQ0 301 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
APOC1-208ENST00000592535 MGAM2Q2M2H8 2515 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 TMEM225BP0DP42 221 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 DCKP27707 260 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 ERP29P30040 261 aaKnown RBP11.24□□□□□ -0.61
APOC1-208ENST00000592535 P2RX3P56373 397 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 ADARB1P78563 741 aaKnown RBP11.24□□□□□ -0.61
APOC1-208ENST00000592535 CDK5R1Q15078 307 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 PLA1AQ53H76 456 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 ZNF626Q68DY1 528 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 ASPHD2Q6ICH7 369 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
APOC1-208ENST00000592535 PACRGLQ8N7B6 248 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 OR51A2Q8NGJ7 313 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 PIFOQ8TCI5 191 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 RPS4Y2Q8TD47 263 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 TAS2R4Q9NYW5 299 aa11.24□□□□□ -0.61
APOC1-208ENST00000592535 TBL2Q9Y4P3 447 aaKnown RBP11.24□□□□□ -0.61
APOC1-208ENST00000592535 SIRT4Q9Y6E7 314 aaPredicted RBP11.24□□□□□ -0.61
APOC1-208ENST00000592535 IRGMA1A4Y4 181 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 CHST1O43916 411 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 MMP23AO75900 390 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 LALBAP00709 142 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 ZNF44P15621 663 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 RAB3AP20336 220 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 LMO1P25800 156 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 SCN1BQ07699 218 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 DYNC1I2Q13409 638 aaKnown RBP11.23□□□□□ -0.61
APOC1-208ENST00000592535 ZNF529Q6P280 563 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 Q6P435 159 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 TRAPPC6BQ86SZ2 158 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 DHRSXQ8N5I4 330 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 SETD9Q8NE22 299 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 RHOFQ9HBH0 211 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 C8orf4Q9NR00 106 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 DIMT1Q9UNQ2 313 aaKnown RBP11.23□□□□□ -0.61
APOC1-208ENST00000592535 SIGLEC9Q9Y336 463 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 EXOSC1Q9Y3B2 195 aaKnown RBP11.23□□□□□ -0.61
APOC1-208ENST00000592535 PCDHGB5Q9Y5G0 923 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
APOC1-208ENST00000592535 IGHV2-26A0A0B4J1V2 119 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 A0A0G2JK05 382 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 MEGF11A6BM72 1044 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 SLC33A1O00400 549 aaPredicted RBP11.22□□□□□ -0.61
APOC1-208ENST00000592535 GABRPO00591 440 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 MYL12AP19105 171 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 GABRA5P31644 462 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 GLIPR1P48060 266 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 RAB13P51153 203 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 AESQ08117 197 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 SSX2Q16385 188 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 CCDC58Q4VC31 144 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 BAIAP2L2Q6UXY1 529 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 TMPRSS11AQ6ZMR5 421 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 SATL1Q86VE3 508 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 GPR148Q8TDV2 347 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 FOXRED1Q96CU9 486 aaPredicted RBP11.22□□□□□ -0.61
APOC1-208ENST00000592535 MALSU1Q96EH3 234 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
APOC1-208ENST00000592535 TMEM133Q9H2Q1 129 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 TCF7L1Q9HCS4 588 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 FBLN5Q9UBX5 448 aa11.22□□□□□ -0.61
APOC1-208ENST00000592535 UBE2J1Q9Y385 318 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms