RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ISG15P05161 165 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ANXA2P07355 339 aaKnown RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 FAHP16930 419 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 PRKXP51817 358 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 UBE2E1P51965 193 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ZNF85Q03923 595 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 DYNC1I2Q13409 638 aaKnown RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ALKBH1Q13686 389 aaKnown RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 CDK5R1Q15078 307 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 FBLN7Q53RD9 439 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 WDR38Q5JTN6 314 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 BCL2L15Q5TBC7 163 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ATPAF1Q5TC12 328 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ZNF826PQ6ZT77 177 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ZNF676Q8N7Q3 588 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 OR1M1Q8NGA1 313 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 SPSB4Q96A44 273 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 ISOC1Q96CN7 298 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 YIPF6Q96EC8 236 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 C16orf92Q96LL3 132 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 HIST1H2AAQ96QV6 131 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 CCL13Q99616 98 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 RTL8AQ9BWD3 113 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 OR10A2Q9H208 303 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 METTL8Q9H825 291 aaKnown RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 RABL2AQ9UBK7 228 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-226ENST00000591534 AASSQ9UDR5 926 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 RABL2BQ9UNT1 228 aa7.74□□□□□ -1.17
BRCA1-226ENST00000591534 IGHV3OR15-7A0A075B7D8 119 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 A0A0U1RQV5 110 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 A0A1W2PPH5 198 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 A0A1W2PQ09 198 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 MEIOCA2RUB1 952 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 TMEM210A6NLX4 147 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 M0R1W7 72 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 IL1AP01583 271 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 OPRL1P41146 370 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 MAP2K4P45985 399 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 CX3CR1P49238 355 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 OR12D2P58182 307 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 KRTAP10-3P60369 221 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 HOXA4Q00056 320 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-226ENST00000591534 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 ZNF684Q5T5D7 378 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 LIPKQ5VXJ0 399 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 DMKNQ6E0U4 476 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-226ENST00000591534 CD200R1LQ6Q8B3 271 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 ZNF485Q8NCK3 441 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 OR5D13Q8NGL4 314 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 OR4C13Q8NGP0 309 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 OR10Z1Q8NGY1 313 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 C8orf46Q8TAG6 207 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 ACOT12Q8WYK0 555 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 PELI1Q96FA3 418 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 REEP6Q96HR9 211 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 OPALINQ96PE5 141 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 AMELYQ99218 206 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 TBX5Q99593 518 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 DCTN5Q9BTE1 182 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 PAPOLGQ9BWT3 736 aaKnown RBP7.73□□□□□ -1.17
BRCA1-226ENST00000591534 EXOSC4Q9NPD3 245 aaKnown RBP7.73□□□□□ -1.17
BRCA1-226ENST00000591534 SIRT7Q9NRC8 400 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 CLEC2DQ9UHP7 191 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 HHLA2Q9UM44 414 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 MPC1Q9Y5U8 109 aa7.73□□□□□ -1.17
BRCA1-226ENST00000591534 TRAV1-2A0A0B4J238 106 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 PNMA8CA0A1B0GUJ8 204 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 hCG_1809904A0A1W2PP81 198 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 A0A1W2PPE2 198 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 A0A1W2PR64 198 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 A0A1W2PRV1 198 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 CDIPTO14735 213 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 MAGEB3O15480 346 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 TSPAN15O95858 294 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 CLEC2LP0C7M8 214 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 SLC2A1P11166 492 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 NDUFB7P17568 137 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 S100A5P33763 92 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 MTNR1BP49286 362 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 RORCP51449 518 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 PPP3R1P63098 170 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 FAM3AP98173 230 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 AANATQ16613 207 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 Q499Y3 187 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 OR2G6Q5TZ20 316 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 MZT2AQ6P582 158 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 WDR82Q6UXN9 313 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 CDH26Q8IXH8 852 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 FAM216BQ8N7L0 139 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 NKAIN3Q8N8D7 197 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 BEND2Q8NDZ0 799 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 OR5D14Q8NGL3 314 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 OR2G2Q8NGZ5 317 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 OR2T6Q8NHC8 308 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 GHSRQ92847 366 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 FOXRED1Q96CU9 486 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-226ENST00000591534 PGAM5Q96HS1 289 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 OR5M11Q96RB7 305 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms