RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ONECUT1Q9UBC0 465 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 MRPS28Q9Y2Q9 187 aaKnown RBP17.6■□□□□ 0.41
ATG4D-212ENST00000590096 SIRPB1O00241 398 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 ZNF737O75373 536 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 ZNF44P15621 663 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 SERPINA2P20848 420 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 ARF6P62330 175 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 SCN1BQ07699 218 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 GPR176Q14439 515 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 NEDD8Q15843 81 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 GDPD3Q7L5L3 318 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 LRRTM1Q86UE6 522 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 FAM185AQ8N0U4 392 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 OR8H2Q8N162 312 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 NR1H4Q96RI1 486 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-212ENST00000590096 PCGF1Q9BSM1 259 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 PPIL3Q9H2H8 161 aaKnown RBP17.59■□□□□ 0.41
ATG4D-212ENST00000590096 VCX3AQ9NNX9 186 aa17.59■□□□□ 0.41
ATG4D-212ENST00000590096 A0A087WXM4 84 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 TMEM82A0PJX8 343 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 TOX4O94842 621 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 OR2H2O95918 312 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 IFNA2P01563 188 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 CALRP27797 417 aaKnown RBP17.58■□□□□ 0.4
ATG4D-212ENST00000590096 RPL31P62899 125 aaKnown RBP17.58■□□□□ 0.4
ATG4D-212ENST00000590096 SLC22A6Q4U2R8 563 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 GLIPR1L1Q6UWM5 242 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 Q8NFD4 153 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 TSPAN14Q8NG11 270 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 OR51T1Q8NGJ9 327 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 UPRTQ96BW1 309 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 WDFY2Q96P53 400 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 KPTNQ9Y664 436 aa17.58■□□□□ 0.4
ATG4D-212ENST00000590096 DEGS1O15121 323 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 EDDM3BP56851 147 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 IL13RA2Q14627 380 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 GRK1Q15835 563 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 C17orf107Q6ZR85 190 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 OSR2Q8N2R0 312 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 KIR3DL3Q8N743 410 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 CHST4Q8NCG5 386 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 OR4M1Q8NGD0 313 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 OR4D6Q8NGJ1 314 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 TBC1D15Q8TC07 691 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 CHST6Q9GZX3 395 aa17.57■□□□□ 0.4
ATG4D-212ENST00000590096 TRDV1A0A1B0GX56 115 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 A0A1W2PPH5 198 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 GTF2F2P13984 249 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 GALP22466 123 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 SYT6Q5T7P8 510 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-212ENST00000590096 CD200R1LQ6Q8B3 271 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 LYPD6Q86Y78 171 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 SIRPDQ9H106 197 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 ZNF696Q9H7X3 374 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 C19orf12Q9NSK7 152 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 NUP50Q9UKX7 468 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 ST3GAL6Q9Y274 331 aa17.56■□□□□ 0.4
ATG4D-212ENST00000590096 TRAV40A0A0B4J280 105 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 MGST3O14880 152 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 PSPNO60542 156 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 FSHBP01225 129 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 MMP9P14780 707 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 EPHA1P21709 976 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 LMO1P25800 156 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 BLMHQ13867 455 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 EDDM3AQ14507 147 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 PIGYQ3MUY2 71 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 NHLRC3Q5JS37 347 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 Q6P435 159 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 OR4S1Q8NGB4 309 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 GHRLQ9UBU3 117 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 STUB1Q9UNE7 303 aa17.55■□□□□ 0.4
ATG4D-212ENST00000590096 M0R1W7 72 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 SLC33A1O00400 549 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-212ENST00000590096 UBBP0CG47 229 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 MYL9P24844 172 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 OR3A1P47881 315 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 RBM11P57052 281 aaKnown RBP17.54■□□□□ 0.4
ATG4D-212ENST00000590096 PDCD1Q15116 288 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 KLF17Q5JT82 389 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-212ENST00000590096 GPR157Q5UAW9 335 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 LINC00596Q86U02 117 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 TBX15Q96SF7 602 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 PPA2Q9H2U2 334 aa17.54■□□□□ 0.4
ATG4D-212ENST00000590096 AK6Q9Y3D8 172 aaKnown RBP17.54■□□□□ 0.4
ATG4D-212ENST00000590096 IGHV3OR16-10A0A075B7F0 116 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 A0A0G2JK05 382 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 A0A1W2PP11 408 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 FUOMA2VDF0 154 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 CRTAPO75718 401 aaPredicted RBP17.53■□□□□ 0.4
ATG4D-212ENST00000590096 OR7C1O76099 320 aaPredicted RBP17.53■□□□□ 0.4
ATG4D-212ENST00000590096 IGHV4-38-2P0DP08 117 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 FPR2P25090 351 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 HTR2CP28335 458 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 C1orf100Q5SVJ3 147 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 TMEM200BQ69YZ2 307 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 C1orf122Q6ZSJ8 110 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 VMO1Q7Z5L0 202 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 MRPS24Q96EL2 167 aaKnown RBP17.53■□□□□ 0.4
ATG4D-212ENST00000590096 CST11Q9H112 138 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms