RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NLRC3Q7RTR2 1065 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM216BQ8N7L0 139 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 CHST4Q8NCG5 386 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 WFDC11Q8NEX6 87 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 CLDND2Q8NHS1 167 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 MED30Q96HR3 178 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 NICN1Q9BSH3 213 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 SLIRPQ9GZT3 109 aaKnown RBP12.66□□□□□ -0.38
ATG4D-211ENST00000589753 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 PATZ1Q9HBE1 687 aaKnown RBP12.66□□□□□ -0.38
ATG4D-211ENST00000589753 RHBDL2Q9NX52 303 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 ARID1AO14497 2285 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 IGHV4-61A0A0C4DH41 118 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 A0A1B0GW55 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 METTL21EPA6NDL7 271 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 SIGLEC5O15389 551 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 USF1P22415 310 aaPredicted RBP12.65□□□□□ -0.38
ATG4D-211ENST00000589753 LMO1P25800 156 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 UBE2NLQ5JXB2 153 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.38
ATG4D-211ENST00000589753 FAM89BQ8N5H3 189 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
ATG4D-211ENST00000589753 ZNRF1Q8ND25 227 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 OR56B1Q8NGI3 324 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 SLC25A38Q96DW6 304 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
ATG4D-211ENST00000589753 OR8B2Q96RD0 313 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 ATG5Q9H1Y0 275 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 CTSZQ9UBR2 303 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 MAB21L2Q9Y586 359 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 CSMD2Q7Z408 3487 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 NAV2Q8IVL1 2488 aa12.65□□□□□ -0.38
ATG4D-211ENST00000589753 A0A075B6Q4 140 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 A0A0A6YYD4 124 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 F5H0A9 414 aaPredicted RBP12.64□□□□□ -0.39
ATG4D-211ENST00000589753 H3BUI4 141 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
ATG4D-211ENST00000589753 NDUFB3O43676 98 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 HEXAP06865 529 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 WNT2P09544 360 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 PITPNBP48739 271 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 VEGFCP49767 419 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 LMO4P61968 165 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 ATAD3CQ5T2N8 411 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 TMEM185AQ8NFB2 350 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 MCFD2Q8NI22 146 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 RAB39BQ96DA2 213 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 SNX22Q96L94 193 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 CMTM3Q96MX0 182 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 NXF2Q9GZY0 626 aaKnown RBP12.64□□□□□ -0.39
ATG4D-211ENST00000589753 SPACA1Q9HBV2 294 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 ZNF581Q9P0T4 197 aa12.64□□□□□ -0.39
ATG4D-211ENST00000589753 ITPR2Q14571 2701 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 A0A096LNT2 108 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 TMEM82A0PJX8 343 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 SOCS1O15524 211 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 PSPNO60542 156 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 HPGDSO60760 199 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 PDCD6O75340 191 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 ZNF737O75373 536 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 SCGNO76038 276 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 SELLP14151 372 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 FUT3P21217 361 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 BLVRBP30043 206 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-211ENST00000589753 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-211ENST00000589753 CNPY1Q3B7I2 92 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 PAN3Q58A45 887 aaKnown RBP12.63□□□□□ -0.39
ATG4D-211ENST00000589753 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 NKAPLQ5M9Q1 402 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 SIGIRRQ6IA17 410 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 C17orf107Q6ZR85 190 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 CMTM4Q8IZR5 234 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 RAB40AQ8WXH6 277 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 PHF21AQ96BD5 680 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 NEDD4LQ96PU5 975 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-211ENST00000589753 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 ABCG5Q9H222 651 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
ATG4D-211ENST00000589753 SLC25A10Q9UBX3 287 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-211ENST00000589753 A3GALT2U3KPV4 340 aa12.63□□□□□ -0.39
ATG4D-211ENST00000589753 FOXI3A8MTJ6 420 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms