RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PHYHIPQ92561 330 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 C10orf35Q96D05 121 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 HAVCR1Q96D42 359 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 CMBLQ96DG6 245 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 TMED9Q9BVK6 235 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 PAPOLGQ9BWT3 736 aaKnown RBP4.89□□□□□ -1.63
VPS25-204ENST00000589577 MEGF9Q9H1U4 602 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 ISG20L2Q9H9L3 353 aaKnown RBP4.89□□□□□ -1.63
VPS25-204ENST00000589577 RAB18Q9NP72 206 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 GPR84Q9NQS5 396 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 FAM206AQ9NX38 181 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 PTTG3PQ9NZH4 202 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 ONECUT1Q9UBC0 465 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 ENPP5Q9UJA9 477 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 SLC7A11Q9UPY5 501 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 SLC22A13Q9Y226 551 aa4.89□□□□□ -1.63
VPS25-204ENST00000589577 LOC100506127A0A0U1RQW1 187 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 A0A1B0GWJ7 208 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 LRRC30A6NM36 301 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 PDCD5O14737 125 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 OGG1O15527 345 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 ADAM20O43506 726 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 CYB5AP00167 134 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 TTRP02766 147 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 ISG15P05161 165 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 PSKH1P11801 424 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 CD36P16671 472 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 CPEP16870 476 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 JUNBP17275 347 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 GALP22466 123 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 SRP9P49458 86 aaKnown RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 PSMD7P51665 324 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 LUMP51884 338 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 GTF2A1P52655 376 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 MFGE8Q08431 387 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 MAB21L1Q13394 359 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 TPBGQ13641 420 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 MPPED2Q15777 294 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 AANATQ16613 207 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 Q499Y3 187 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 HSD17B12Q53GQ0 312 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 GLYATL3Q5SZD4 288 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 ZNF684Q5T5D7 378 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 SYT6Q5T7P8 510 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 DMKNQ6E0U4 476 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 SFRP4Q6FHJ7 346 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 C10orf99Q6UWK7 81 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 FBXW12Q6X9E4 464 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 LIAT1Q6ZQX7 453 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 COLCA1Q6ZS62 124 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 ZFP41Q8N8Y5 198 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 OR56B2PQ8NGI1 322 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 OR13G1Q8NGZ3 307 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 OR2AE1Q8NHA4 323 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 Q8TCH9 128 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 GHSRQ92847 366 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 MUL1Q969V5 352 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 TMEM106AQ96A25 262 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 S100A13Q99584 98 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 MICU1Q9BPX6 476 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 PDCD1LG2Q9BQ51 273 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 C14orf119Q9NWQ9 140 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 NDUFB11Q9NX14 153 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 NDUFA13Q9P0J0 144 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 FRRS1LQ9P0K9 344 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 STUB1Q9UNE7 303 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 PIGLQ9Y2B2 252 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 LSM2Q9Y333 95 aaKnown RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 STARD10Q9Y365 291 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 TSSC4Q9Y5U2 329 aaPredicted RBP4.88□□□□□ -1.63
VPS25-204ENST00000589577 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
VPS25-204ENST00000589577 SORL1Q92673 2214 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 hCG_38984A0A1B0GV85 526 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 TCRBV4S1A1TA0A5B7 111 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 OR4C45A6NMZ5 311 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 CD300LBA8K4G0 201 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 IQCF6A8MYZ5 107 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 PRR32B1ATL7 298 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 AIREO43918 545 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 RAMP3O60896 148 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 NRASP01111 189 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 HCKP08631 526 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 RAB3AP20336 220 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 PRKACBP22694 351 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 KIR3DL2P43630 455 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 SOX2P48431 317 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 THBS3P49746 956 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 VEGFCP49767 419 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 GSK3AP49840 483 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 UBE2E1P51965 193 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 CAPZA1P52907 286 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 BLCAPP62952 87 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 ZNF92Q03936 586 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 GK2Q14410 553 aaPredicted RBP4.87□□□□□ -1.63
VPS25-204ENST00000589577 OR8G1Q15617 311 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 OR8B8Q15620 311 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 C11orf91Q3C1V1 193 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 SNAI3Q3KNW1 292 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 KRTAP27-1Q3LI81 207 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms