RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 RHOFQ9HBH0 211 aa14.38□□□□□ -0.11
TPM4-206ENST00000587201 TRRAPQ9Y4A5 3859 aa14.38□□□□□ -0.11
TPM4-206ENST00000587201 MAGEB3O15480 346 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 OR2H2O95918 312 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 ARG1P05089 322 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 TMEM225BP0DP42 221 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 RAB3AP20336 220 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 OR3A1P47881 315 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 SOX2P48431 317 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 SCN1BQ07699 218 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 KISS1Q15726 138 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 CCDC58Q4VC31 144 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 OR2G6Q5TZ20 316 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 RPL22L1Q6P5R6 122 aaKnown RBP14.37□□□□□ -0.11
TPM4-206ENST00000587201 CRIP3Q6Q6R5 217 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 TCF23Q7RTU1 214 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 LHFPL4Q7Z7J7 247 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 TRAPPC6BQ86SZ2 158 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 C16orf95Q9H693 158 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 LINC00312Q9Y6C7 94 aa14.37□□□□□ -0.11
TPM4-206ENST00000587201 TSPAN9O75954 239 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 ZNF44P15621 663 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 MYL12AP19105 171 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 ERP29P30040 261 aaKnown RBP14.36□□□□□ -0.11
TPM4-206ENST00000587201 P2RX3P56373 397 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 DYNC1I2Q13409 638 aaKnown RBP14.36□□□□□ -0.11
TPM4-206ENST00000587201 IL18R1Q13478 541 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 CDK5R1Q15078 307 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 AANATQ16613 207 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 XAF1Q6GPH4 301 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 GPR148Q8TDV2 347 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 CPNE2Q96FN4 548 aaPredicted RBP14.36□□□□□ -0.11
TPM4-206ENST00000587201 GPER1Q99527 375 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 CITED1Q99966 193 aa14.36□□□□□ -0.11
TPM4-206ENST00000587201 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
TPM4-206ENST00000587201 DIMT1Q9UNQ2 313 aaKnown RBP14.36□□□□□ -0.11
TPM4-206ENST00000587201 EXOSC1Q9Y3B2 195 aaKnown RBP14.36□□□□□ -0.11
TPM4-206ENST00000587201 FUOMA2VDF0 154 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 CLPXO76031 633 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 CD2P06729 351 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 PROK1P58294 105 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 ZP1P60852 638 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 ADARB1P78563 741 aaKnown RBP14.35□□□□□ -0.11
TPM4-206ENST00000587201 MED21Q13503 144 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 PLA1AQ53H76 456 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 ZNF626Q68DY1 528 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 SATL1Q86VE3 508 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 RGP1Q92546 391 aaPredicted RBP14.35□□□□□ -0.11
TPM4-206ENST00000587201 TMEM80Q96HE8 168 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 TAS2R4Q9NYW5 299 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 TBL2Q9Y4P3 447 aaKnown RBP14.35□□□□□ -0.11
TPM4-206ENST00000587201 SESN1Q9Y6P5 492 aa14.35□□□□□ -0.11
TPM4-206ENST00000587201 FAM90A8PA6NJQ4 464 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 ODF3BA8MYP8 253 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 DEGS1O15121 323 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 LMO1P25800 156 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 SLC35E4Q6ICL7 350 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 OR11H6Q8NGC7 330 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 OR51A2Q8NGJ7 313 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 TMEM106AQ96A25 262 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 MALSU1Q96EH3 234 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 RAB18Q9NP72 206 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 CLEC2DQ9UHP7 191 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 UBE2J1Q9Y385 318 aaPredicted RBP14.34□□□□□ -0.11
TPM4-206ENST00000587201 HSPE1-MOB4S4R3N1 261 aa14.34□□□□□ -0.11
TPM4-206ENST00000587201 TRGV10A0A0A0MS01 117 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 A0A0G2JK05 382 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 ANKRD65E5RJM6 399 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 MTNR1BP49286 362 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 AESQ08117 197 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 FAM189A2Q15884 450 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 ZNF529Q6P280 563 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 Q6P435 159 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 TREML4Q6UXN2 200 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 C8orf59Q8N0T1 100 aaPredicted RBP14.33□□□□□ -0.12
TPM4-206ENST00000587201 DYNAPQ8N1N2 210 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 CHST4Q8NCG5 386 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 PXT1Q8NFP0 134 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 RPS4Y2Q8TD47 263 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 TNFAIP8L1Q8WVP5 186 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 GGHQ92820 318 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 FOXRED1Q96CU9 486 aaPredicted RBP14.33□□□□□ -0.12
TPM4-206ENST00000587201 NR1H4Q96RI1 486 aaPredicted RBP14.33□□□□□ -0.12
TPM4-206ENST00000587201 FAM192AQ9GZU8 254 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 ABCB10Q9NRK6 738 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 ING3Q9NXR8 418 aa14.33□□□□□ -0.12
TPM4-206ENST00000587201 SIRT4Q9Y6E7 314 aaPredicted RBP14.33□□□□□ -0.12
TPM4-206ENST00000587201 DSCAML1Q8TD84 2053 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 MGAM2Q2M2H8 2515 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 IGHV2-26A0A0B4J1V2 119 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 SLC33A1O00400 549 aaPredicted RBP14.32□□□□□ -0.12
TPM4-206ENST00000587201 GABRPO00591 440 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 TIMM23O14925 209 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 OGG1O15527 345 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 GABRA5P31644 462 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 CAPGP40121 348 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 GLIPR1P48060 266 aa14.32□□□□□ -0.12
TPM4-206ENST00000587201 PPP3R1P63098 170 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms