RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 DHFR2Q86XF0 187 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 EGFL6Q8IUX8 553 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 COMMD1Q8N668 190 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 KLHL30-AS1Q8NEE0 82 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 APOL4Q9BPW4 351 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 PLEKHA1Q9HB21 404 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 RBFOX1Q9NWB1 397 aaKnown RBP11.15□□□□□ -0.62
CXXC1-208ENST00000587170 MRM2Q9UI43 246 aaKnown RBP11.15□□□□□ -0.62
CXXC1-208ENST00000587170 GTF2A1LQ9UNN4 478 aa11.15□□□□□ -0.62
CXXC1-208ENST00000587170 TRGV10A0A0A0MS01 117 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 FGF16O43320 207 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 GATBO75879 557 aaKnown RBP11.14□□□□□ -0.63
CXXC1-208ENST00000587170 CST1P01037 141 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 CSN2P05814 226 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 MNDAP41218 407 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 MS4A2Q01362 244 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 TRIM25Q14258 630 aaKnown RBP11.14□□□□□ -0.63
CXXC1-208ENST00000587170 C9orf152Q5JTZ5 239 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 CASC10Q5T4H9 136 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 TMEM236Q5W0B7 351 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 ZNF695Q8IW36 515 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 FAM58AQ8N1B3 248 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 CCDC54Q8NEL0 328 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 DNAAF1Q8NEP3 725 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 RAX2Q96IS3 184 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 ADGRL4Q9HBW9 690 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 PCDHB16Q9NRJ7 776 aa11.14□□□□□ -0.63
CXXC1-208ENST00000587170 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 MAGEB4O15481 346 aaPredicted RBP11.13□□□□□ -0.63
CXXC1-208ENST00000587170 IGHG2P01859 326 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 FAM106CPP0CH98 169 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 CHATP28329 748 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 NPBWR2P48146 333 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 ACTR3P61158 418 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 PLEKHG7Q6ZR37 379 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 CATSPERDQ86XM0 798 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 ADGRG5Q8IZF4 528 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 C10orf35Q96D05 121 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 BORCS8Q96FH0 119 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 NOL4LQ96MY1 436 aaPredicted RBP11.13□□□□□ -0.63
CXXC1-208ENST00000587170 TEX12Q9BXU0 123 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 CLN6Q9NWW5 311 aa11.13□□□□□ -0.63
CXXC1-208ENST00000587170 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 FUOMA2VDF0 154 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 FAM172BPA6NC97 362 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 BCL3P20749 454 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 DUSP1P28562 367 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 PTGFRP43088 359 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 LUMP51884 338 aaPredicted RBP11.12□□□□□ -0.63
CXXC1-208ENST00000587170 MNAT1P51948 309 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 UTF1Q5T230 341 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 SLC35F2Q8IXU6 374 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 HS3ST5Q8IZT8 346 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 DNAJC9Q8WXX5 260 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 PP6455Q8WZ26 134 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 ASB9Q96DX5 294 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 PRR25Q96S07 402 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 COMMD4Q9H0A8 199 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 ZNF556Q9HAH1 456 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 HMG20AQ9NP66 347 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 MED4Q9NPJ6 270 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 GLS2Q9UI32 602 aa11.12□□□□□ -0.63
CXXC1-208ENST00000587170 ODAMA1E959 279 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 CCL24O00175 119 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 SYT7O43581 403 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 PRKYO43930 277 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 OR2H2O95918 312 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
CXXC1-208ENST00000587170 ANXA8P13928 327 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 HOXB6P17509 224 aaKnown RBP11.11□□□□□ -0.63
CXXC1-208ENST00000587170 PRKACAP17612 351 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 GLIPR1P48060 266 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 RBP2P50120 134 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 PRRX1P54821 245 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 SLC35B1P78383 322 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 EFNB1P98172 346 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 C9orf66Q5T8R8 295 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
CXXC1-208ENST00000587170 STPG2Q8N412 459 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 OR56B4Q8NH76 319 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 OR9G1Q8NH87 305 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 TOMM40LQ969M1 308 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 COQ2Q96H96 371 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 TVP23BQ9NYZ1 205 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 SCOCQ9UIL1 159 aa11.11□□□□□ -0.63
CXXC1-208ENST00000587170 HYDINQ4G0P3 5121 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 ZNF729A6NN14 1252 aaPredicted RBP11.1□□□□□ -0.63
CXXC1-208ENST00000587170 SERPINE3A8MV23 424 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 ZNF670-ZNF695F2Z2N8 137 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 SIRPB1O00241 398 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 TOR1AO14656 332 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 INMTO95050 263 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 CGB3P0DN86 165 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 CGB7P0DN87 165 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 AESQ08117 197 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms