RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 SCN1BQ07699 218 aa11.65□□□□□ -0.54
TPM4-205ENST00000586833 AWAT2Q6E213 333 aa11.65□□□□□ -0.54
TPM4-205ENST00000586833 ASCL4Q6XD76 172 aa11.65□□□□□ -0.54
TPM4-205ENST00000586833 PHC2Q8IXK0 858 aa11.65□□□□□ -0.54
TPM4-205ENST00000586833 SPARTQ8N0X7 666 aa11.65□□□□□ -0.54
TPM4-205ENST00000586833 OSR2Q8N2R0 312 aa11.65□□□□□ -0.54
TPM4-205ENST00000586833 MRPS24Q96EL2 167 aaKnown RBP11.65□□□□□ -0.54
TPM4-205ENST00000586833 MRPS28Q9Y2Q9 187 aaKnown RBP11.65□□□□□ -0.54
TPM4-205ENST00000586833 TRAV40A0A0B4J280 105 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 SIRPB1O00241 398 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 CCRL2O00421 344 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 PDCD5O14737 125 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 OR2H2O95918 312 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 FSHBP01225 129 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 TFF1P04155 84 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 UCHL1P09936 223 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 SRMP19623 302 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 GALP22466 123 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 MYL9P24844 172 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 KCNJ3P48549 501 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 UBE2UQ5VVX9 321 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 ASPHD2Q6ICH7 369 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 GLIPR1L1Q6UWM5 242 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 C1orf229Q6ZS94 237 aaPredicted RBP11.64□□□□□ -0.55
TPM4-205ENST00000586833 USP43Q70EL4 1123 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 MUL1Q969V5 352 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 NR1H4Q96RI1 486 aaPredicted RBP11.64□□□□□ -0.55
TPM4-205ENST00000586833 SIRPDQ9H106 197 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 CST11Q9H112 138 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
TPM4-205ENST00000586833 PIN1P1O15428 100 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 ZNF737O75373 536 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 CDRT1O95170 752 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 CALCBP10092 127 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 SERPINA2P20848 420 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 LMO1P25800 156 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 DUSP1P28562 367 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 ERP29P30040 261 aaKnown RBP11.63□□□□□ -0.55
TPM4-205ENST00000586833 RPS25P62851 125 aaKnown RBP11.63□□□□□ -0.55
TPM4-205ENST00000586833 EDDM3AQ14507 147 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 MPV17LQ2QL34 196 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 SLC22A6Q4U2R8 563 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 NHLRC3Q5JS37 347 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 Q8NFD4 153 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 OR51T1Q8NGJ9 327 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 LHX4Q969G2 390 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 ORAI1Q96D31 301 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 BARHL1Q9BZE3 327 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 NDUFB11Q9NX14 153 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 ST3GAL6Q9Y274 331 aa11.63□□□□□ -0.55
TPM4-205ENST00000586833 CHD3Q12873 2000 aaKnown RBP11.62□□□□□ -0.55
TPM4-205ENST00000586833 A0A087WXM4 84 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 TRGV10A0A0A0MS01 117 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 SC5DO75845 299 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 RBP4P02753 201 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 CSN2P05814 226 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 MMP9P14780 707 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 PRTN3P24158 256 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 CALRP27797 417 aaKnown RBP11.62□□□□□ -0.55
TPM4-205ENST00000586833 P2RX3P56373 397 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 ERVFRD-1P60508 538 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 PAN3Q58A45 887 aaKnown RBP11.62□□□□□ -0.55
TPM4-205ENST00000586833 METAP1DQ6UB28 335 aaPredicted RBP11.62□□□□□ -0.55
TPM4-205ENST00000586833 C9orf139Q6ZV77 190 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 TRAPPC6BQ86SZ2 158 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 OR4M1Q8NGD0 313 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 OR10K1Q8NGX5 313 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 TMEM158Q8WZ71 300 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 TBX15Q96SF7 602 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 CHST6Q9GZX3 395 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 ZMAT3Q9HA38 289 aaKnown RBP11.62□□□□□ -0.55
TPM4-205ENST00000586833 PLGRKTQ9HBL7 147 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 C19orf12Q9NSK7 152 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 SF3B6Q9Y3B4 125 aaKnown RBP11.62□□□□□ -0.55
TPM4-205ENST00000586833 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
TPM4-205ENST00000586833 NSD1Q96L73 2696 aaPredicted RBP11.61□□□□□ -0.55
TPM4-205ENST00000586833 IGHV1-69DA0A0B4J2H0 117 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 TMEM82A0PJX8 343 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 TRIM77I1YAP6 450 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 FCN3O75636 299 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 OR7C1O76099 320 aaPredicted RBP11.61□□□□□ -0.55
TPM4-205ENST00000586833 IGHV1-69P01742 117 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 RBM11P57052 281 aaKnown RBP11.61□□□□□ -0.55
TPM4-205ENST00000586833 RBM39Q14498 530 aaKnown RBP11.61□□□□□ -0.55
TPM4-205ENST00000586833 KLF17Q5JT82 389 aaPredicted RBP11.61□□□□□ -0.55
TPM4-205ENST00000586833 TMEM200BQ69YZ2 307 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 C17orf107Q6ZR85 190 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 OR6M1Q8NGM8 313 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 ZNF714Q96N38 554 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 SLC6A7Q99884 636 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 GAL3ST2Q9H3Q3 398 aa11.61□□□□□ -0.55
TPM4-205ENST00000586833 IFT22Q9H7X7 185 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms