RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 FAM90A16PA6NEW6 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A20PA6NIJ5 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A8PA6NJQ4 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A7PA6NKC0 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A22PA8MWA6 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A12PA8MX19 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A5PA8MXJ8 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A23PA8MXZ1 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 SIRPB1O00241 398 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 DVL1O14640 695 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 SMAD7O15105 426 aaKnown RBP11.34□□□□□ -0.59
VMP1-203ENST00000586245 PAHP00439 452 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A15PP0C7V4 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A13PP0C7W8 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A14PP0C7W9 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 FAM90A24PP0C7X0 464 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 RAB6AP20340 208 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 IL2RGP31785 369 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 NPY4RP50391 375 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 SCAND1P57086 179 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 RPS27AP62979 156 aaKnown RBP11.34□□□□□ -0.59
VMP1-203ENST00000586245 PDCD1Q15116 288 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 TAF9Q16594 264 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 Q6P435 159 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 PPP1R35Q8TAP8 253 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 AP3S1Q92572 193 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 PTX4Q96A99 478 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
VMP1-203ENST00000586245 DGCR14Q96DF8 476 aaKnown RBP11.34□□□□□ -0.59
VMP1-203ENST00000586245 SSBP3Q9BWW4 388 aaPredicted RBP11.34□□□□□ -0.59
VMP1-203ENST00000586245 BARHL1Q9BZE3 327 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 SPACA1Q9HBV2 294 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
VMP1-203ENST00000586245 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 ETV7Q9Y603 341 aa11.34□□□□□ -0.59
VMP1-203ENST00000586245 A0A1B0GW55 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 METTL21EPA6NDL7 271 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 GPR37O15354 613 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 FOXH1O75593 365 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 TK1P04183 234 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 SELLP14151 372 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 ZNF182P17025 639 aaPredicted RBP11.33□□□□□ -0.6
VMP1-203ENST00000586245 NDUFB7P17568 137 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 LMO1P25800 156 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 GZMKP49863 264 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 TMEM249Q2WGJ8 235 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 WDR25Q64LD2 544 aaPredicted RBP11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
VMP1-203ENST00000586245 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 CIARTQ8N365 385 aaPredicted RBP11.33□□□□□ -0.6
VMP1-203ENST00000586245 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DYNC2LI1Q8TCX1 351 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 ACOT12Q8WYK0 555 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 ST8SIA4Q92187 359 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 LPAR5Q9H1C0 372 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 IFT22Q9H7X7 185 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 BATF3Q9NR55 127 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 SPATA2Q9UM82 520 aa11.33□□□□□ -0.6
VMP1-203ENST00000586245 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 B4DSR2 109 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 K7N7A8 449 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 PHF1O43189 567 aaPredicted RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 SEC61A1P61619 476 aaKnown RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 GRK1Q15835 563 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 PAN3Q58A45 887 aaKnown RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 MZT2AQ6P582 158 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 GDPD3Q7L5L3 318 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 OR8H2Q8N162 312 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 H1FXQ92522 213 aaKnown RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 COX4I2Q96KJ9 171 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 NICN1Q9BSH3 213 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 CHST6Q9GZX3 395 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
VMP1-203ENST00000586245 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
VMP1-203ENST00000586245 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
VMP1-203ENST00000586245 TMEM82A0PJX8 343 aa11.31□□□□□ -0.6
VMP1-203ENST00000586245 MCRIP1C9JLW8 97 aa11.31□□□□□ -0.6
VMP1-203ENST00000586245 HSPB6O14558 160 aa11.31□□□□□ -0.6
VMP1-203ENST00000586245 MGST3O14880 152 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms