RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CD2P06729 351 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 TMEM225BP0DP42 221 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 DUSP1P28562 367 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 AANATQ16613 207 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 SMN1Q16637 294 aaKnown RBP10.08□□□□□ -0.8
SS18-225ENST00000585121 LRRC75BQ2VPJ9 315 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 ZNF691Q5VV52 312 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 RPL22L1Q6P5R6 122 aaKnown RBP10.08□□□□□ -0.8
SS18-225ENST00000585121 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 PARP16Q8N5Y8 322 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 OR5D18Q8NGL1 313 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 SPACA5Q96QH8 159 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 PDCD1LG2Q9BQ51 273 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 ZNF649Q9BS31 505 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 YTHDF1Q9BYJ9 559 aaKnown RBP10.08□□□□□ -0.8
SS18-225ENST00000585121 CHST6Q9GZX3 395 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 MEGF9Q9H1U4 602 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 RAB18Q9NP72 206 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 IL36RNQ9UBH0 155 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 EXOSC1Q9Y3B2 195 aaKnown RBP10.08□□□□□ -0.8
SS18-225ENST00000585121 LINC00312Q9Y6C7 94 aa10.08□□□□□ -0.8
SS18-225ENST00000585121 H3BUX3 64 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 SIRPB1O00241 398 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 WBP4O75554 376 aaKnown RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 KDM4BO94953 1096 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 ARG1P05089 322 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 LIMS3P0CW19 117 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 LIMS4P0CW20 117 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 CALCBP10092 127 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 RAB3AP20336 220 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 BMXP51813 675 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 DLX6P56179 175 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 SCN1BQ07699 218 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 KISS1Q15726 138 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 TRAPPC6BQ86SZ2 158 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 C8orf59Q8N0T1 100 aaPredicted RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 DTX3Q8N9I9 347 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 CNIH3Q8TBE1 160 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 GPR148Q8TDV2 347 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 WFDC12Q8WWY7 111 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 FOXRED1Q96CU9 486 aaPredicted RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 GPER1Q99527 375 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 TBL2Q9Y4P3 447 aaKnown RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 MEX3AA1L020 520 aaKnown RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 TNFAIP8O95379 198 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 CLIC3O95833 236 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 GNAO1P09471 354 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 IGHV1-8P0DP01 117 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 ZNF44P15621 663 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 ERP29P30040 261 aaKnown RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 GTF2A1P52655 376 aaPredicted RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 DYNC1I2Q13409 638 aaKnown RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 LY6EQ16553 131 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 Q6ZSV7 163 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 SATL1Q86VE3 508 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 OR4S1Q8NGB4 309 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 OR52N4Q8NGI2 321 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 TMEM80Q96HE8 168 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 ABCB10Q9NRK6 738 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 BABAM2Q9NXR7 383 aa10.07□□□□□ -0.8
SS18-225ENST00000585121 DIMT1Q9UNQ2 313 aaKnown RBP10.07□□□□□ -0.8
SS18-225ENST00000585121 TRGV10A0A0A0MS01 117 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 IGKV1-12A0A0C4DH73 117 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 TIMM23O14925 209 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 DEGS1O15121 323 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 PSPNO60542 156 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 TSPAN9O75954 239 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 OR2H2O95918 312 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 IGKV1D-12P01611 117 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 OR3A1P47881 315 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 SOX2P48431 317 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 ETV1P50549 477 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 P2RX3P56373 397 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 PPP3R1P63098 170 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 CDK5R1Q15078 307 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 TPRX1Q8N7U7 411 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 CHST4Q8NCG5 386 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 MALSU1Q96EH3 234 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 GAL3ST2Q9H3Q3 398 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 UBE2J1Q9Y385 318 aaPredicted RBP10.06□□□□□ -0.8
SS18-225ENST00000585121 SESN1Q9Y6P5 492 aa10.06□□□□□ -0.8
SS18-225ENST00000585121 H3BUI4 141 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 CLPXO76031 633 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 MTNR1BP49286 362 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 OR2G6Q5TZ20 316 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 ZNF626Q68DY1 528 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 OR11H6Q8NGC7 330 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 FBLIM1Q8WUP2 373 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 AJUBAQ96IF1 538 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 CITED1Q99966 193 aa10.05□□□□□ -0.8
SS18-225ENST00000585121 TCF7L1Q9HCS4 588 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms