RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TMEM186Q96B77 213 aa13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 MRPS24Q96EL2 167 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 TMEM246Q9BRR3 403 aa13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 MRI1Q9BV20 369 aa13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 FBLN5Q9UBX5 448 aa13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 MIOXQ9UGB7 285 aa13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 OR5V1Q9UGF6 321 aa13.31□□□□□ -0.28
CSNK1D-223ENST00000584472 WNK2Q9Y3S1 2297 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 CUBNO60494 3623 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 TMEM272A0A1B0GTI8 110 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 OR2AT4A6NND4 320 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 TNFRSF13BO14836 293 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 CRTAPO75718 401 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 PAHP00439 452 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 PSG2P11465 335 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 SNRPBP14678 240 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 MGMTP16455 207 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 ZNF182P17025 639 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 SCAND1P57086 179 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 ZNF146Q15072 292 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 NHLRC3Q5JS37 347 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 OR5T2Q8NGG2 359 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 ANGPTL6Q8NI99 470 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 KCNG3Q8TAE7 436 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 FAM46BQ96A09 425 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 KCTD12Q96CX2 325 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 BEX2Q9BXY8 128 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 SHARPINQ9H0F6 387 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 BANF2Q9H503 90 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 LPAR2Q9HBW0 351 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 HIF1ANQ9NWT6 349 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 ABRACLQ9P1F3 81 aa13.3□□□□□ -0.28
CSNK1D-223ENST00000584472 IGKV1D-17A0A075B6S4 117 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 PPIAL4CA0A0B4J2A2 164 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 RFPL4AA6NLU0 287 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 A8MXK9 166 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 RFPL4AL1F8VTS6 287 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 NDUFA2O43678 99 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 FOXH1O75593 365 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 MPIG6BO95866 241 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 GYPAP02724 150 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 WNT2P09544 360 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 RPS2P15880 293 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 AMY2BP19961 511 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 HNF1AP20823 631 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 GATA3P23771 443 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 SOX6P35712 828 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 RBM11P57052 281 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 PLA2G7Q13093 441 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 PIGYQ3MUY2 71 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 ESCO2Q56NI9 601 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 SPIN3Q5JUX0 258 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 NLRC3Q7RTR2 1065 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 LGALS14Q8TCE9 139 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 NEIL1Q96FI4 390 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 TMEM59Q9BXS4 323 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 SELENOIQ9C0D9 397 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 SEBOXQ9HB31 216 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 CCDC59Q9P031 241 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 ZNF222Q9UK12 451 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 ST3GAL6Q9Y274 331 aa13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 POLR3KQ9Y2Y1 108 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-223ENST00000584472 TFF1P04155 84 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 RAB6AP20340 208 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 DUSP1P28562 367 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 PRDX2P32119 198 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 CEBPDP49716 269 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 RPS27AP62979 156 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 DYNC1I2Q13409 638 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 IL13RA2Q14627 380 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 FAM120AOSQ5T036 256 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 ATPAF1Q5TC12 328 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 CD177Q8N6Q3 437 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 OR5H6Q8NGV6 325 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 ACOT12Q8WYK0 555 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 AP3S1Q92572 193 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 PTX4Q96A99 478 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 Q96M66 194 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 TM2D1Q9BX74 207 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 DNTTIP1Q9H147 329 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 LPAR5Q9H1C0 372 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 OR14J1Q9UGF5 321 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 RAB22AQ9UL26 194 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 SPATA2Q9UM82 520 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
CSNK1D-223ENST00000584472 A0A0G2JMP0 313 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 A0A0X1KG70 313 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 J3QLI3 93 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 HAND1O96004 215 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 GABRA2P47869 451 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 PITPNBP48739 271 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 EFNB2P52799 333 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 TAF9Q16594 264 aa13.27□□□□□ -0.29
CSNK1D-223ENST00000584472 Q6P435 159 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms