RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 P2RY6Q15077 328 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 HAGHLQ6PII5 290 aaPredicted RBP19.39■□□□□ 0.69
CCDC47-204ENST00000582252 GSG1LQ6UXU4 331 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 TMEM230Q96A57 120 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 A0A1W2PR80 420 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 DBX1A6NMT0 343 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 NOS1APO75052 506 aaPredicted RBP19.38■□□□□ 0.69
CCDC47-204ENST00000582252 IGKV3-15P01624 115 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 CTSDP07339 412 aaPredicted RBP19.38■□□□□ 0.69
CCDC47-204ENST00000582252 RPA2P15927 270 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 OPRM1P35372 400 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 SRSF7Q16629 238 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCDC47-204ENST00000582252 SPATA46Q5T0L3 261 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 BEND4Q6ZU67 534 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 CHMP1AQ9HD42 196 aaPredicted RBP19.38■□□□□ 0.69
CCDC47-204ENST00000582252 MTCH1Q9NZJ7 389 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 ZNF581Q9P0T4 197 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 UBQLN2Q9UHD9 624 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 MAB21L2Q9Y586 359 aa19.38■□□□□ 0.69
CCDC47-204ENST00000582252 J3QT63 122 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 CA6P23280 308 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 GLP1RP43220 463 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 TDGF1P3P51864 188 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 UCP2P55851 309 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 BAMBIQ13145 260 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 IL13RA2Q14627 380 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 SLC22A25Q6T423 547 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 DHRS11Q6UWP2 260 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 CLEC18BQ6UXF7 455 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 OR1J1Q8NGS3 322 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 SLX1AQ9BQ83 275 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 RAB18Q9NP72 206 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 DECR2Q9NUI1 292 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 RCC2Q9P258 522 aaKnown RBP19.37■□□□□ 0.69
CCDC47-204ENST00000582252 INTS1Q8N201 2190 aaKnown RBP19.37■□□□□ 0.69
CCDC47-204ENST00000582252 FAM25EA8MYX2 175 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 CCSO14618 274 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 RP2O75695 350 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 SLC25A4P12235 298 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 TMEM65Q6PI78 240 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 TMUB2Q71RG4 321 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 SNRNP40Q96DI7 357 aaKnown RBP19.37■□□□□ 0.69
CCDC47-204ENST00000582252 OR2J1Q9GZK6 312 aa19.37■□□□□ 0.69
CCDC47-204ENST00000582252 C5orf51A6NDU8 294 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 IQCF6A8MYZ5 107 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 MSTNO14793 375 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 TNFSF13O75888 250 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 PRKACAP17612 351 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 FOXF2Q12947 444 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 Q6ZS49 121 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 MYPOPQ86VE0 399 aaPredicted RBP19.36■□□□□ 0.69
CCDC47-204ENST00000582252 Q8IYB0 196 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 C1orf174Q8IYL3 243 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 WDR31Q8NA23 367 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 SLC25A40Q8TBP6 338 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 OR51I2Q9H344 312 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 POLDIP2Q9Y2S7 368 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 AMDHD2Q9Y303 409 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 USP24Q9UPU5 2620 aa19.36■□□□□ 0.69
CCDC47-204ENST00000582252 TRAV14DV4A0A0A6YYC5 116 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 LRP5LA4QPB2 252 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 ERVH48-1M5A8F1 160 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 SYNGR1O43759 233 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 MPC2O95563 127 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 GLAP06280 429 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 GLRA1P23415 457 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 CALCRP30988 508 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 IKZF1Q13422 519 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 SLC9A3R2Q15599 337 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 ZNF660Q6AZW8 331 aaPredicted RBP19.35■□□□□ 0.69
CCDC47-204ENST00000582252 C11orf87Q6NUJ2 197 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 BRICD5Q6PL45 260 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 C3P1Q6ZMU1 363 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 ZNF546Q86UE3 836 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 CXorf67Q86X51 503 aaPredicted RBP19.35■□□□□ 0.69
CCDC47-204ENST00000582252 SGPP2Q8IWX5 399 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 DYRK2Q92630 601 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 STARD4Q96DR4 205 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 NMES1Q9C002 83 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 MFFQ9GZY8 342 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 ARL6Q9H0F7 186 aa19.35■□□□□ 0.69
CCDC47-204ENST00000582252 RIMS4Q9H426 269 aaPredicted RBP19.35■□□□□ 0.69
CCDC47-204ENST00000582252 A0A0D9SG52 128 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 LILRA1O75019 489 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 PI3P19957 117 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 PDCD1Q15116 288 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 TSC22D1Q15714 1073 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 C1orf185Q5T7R7 199 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 BHLHA15Q7RTS1 189 aaPredicted RBP19.34■□□□□ 0.69
CCDC47-204ENST00000582252 BATF2Q8N1L9 274 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 ZNF610Q8N9Z0 462 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 THAP6Q8TBB0 222 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 CCDC120Q96HB5 630 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 CGAP01215 116 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 IFNA2P01563 188 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 RBMXP38159 391 aaKnown RBP19.34■□□□□ 0.69
CCDC47-204ENST00000582252 SUPT4H1P63272 117 aaKnown RBP19.34■□□□□ 0.69
CCDC47-204ENST00000582252 EXOSC2Q13868 293 aaKnown RBP19.34■□□□□ 0.69
CCDC47-204ENST00000582252 OR8H3Q8N146 312 aa19.34■□□□□ 0.69
CCDC47-204ENST00000582252 FAM58AQ8N1B3 248 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms