RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 OR2H2O95918 312 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 LIAT1Q6ZQX7 453 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 PQLC1Q8N2U9 271 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 OR2T6Q8NHC8 308 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 FAM110DQ8TAY7 271 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 NKX3-1Q99801 234 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 NPFFR1Q9GZQ6 430 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 TGP01266 2768 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 MMP23AO75900 390 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 KDM4BO94953 1096 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 ZFPL1O95159 310 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 JUNBP17275 347 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 ERP29P30040 261 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 P2RX3P56373 397 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 RAB40BQ12829 278 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 HERPUD1Q15011 391 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 Q6ZTK2 550 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 TRAPPC6BQ86SZ2 158 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 C11orf44Q8N8P7 122 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 OR52I1Q8NGK6 324 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 FOXRED1Q96CU9 486 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 MYCBPQ99417 103 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 TMEM133Q9H2Q1 129 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 NEK6Q9HC98 313 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 EXOSC4Q9NPD3 245 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 ABCB10Q9NRK6 738 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 TCF19Q9Y242 345 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 HILPDAQ9Y5L2 63 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 SESN1Q9Y6P5 492 aa17.18■□□□□ 0.34
CSNK1D-216ENST00000581108 IGHV2-26A0A0B4J1V2 119 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 SCN1BQ07699 218 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 C2orf68Q2NKX9 166 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 PDLIM3Q53GG5 364 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 C11orf88Q6PI97 169 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 TMEM219Q86XT9 240 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 SERPINA12Q8IW75 414 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 KLHDC1Q8N7A1 406 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 OR5D14Q8NGL3 314 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 OR5AK2Q8NH90 309 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 RPS4Y2Q8TD47 263 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 APH1BQ8WW43 257 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 PDCD1LG2Q9BQ51 273 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 INPP5EQ9NRR6 644 aa17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 UBE2J1Q9Y385 318 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-216ENST00000581108 A6NDX4 124 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 HCKP08631 526 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 LMO1P25800 156 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 GBX2P52951 348 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 AESQ08117 197 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 HABP2Q14520 560 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 KISS1Q15726 138 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 BAIAP2L2Q6UXY1 529 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 SAXO1Q8IYX7 474 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 CDCA4Q9BXL8 241 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 COMMD4Q9H0A8 199 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 ZNF702PQ9H963 129 aa17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 MRPS18AQ9NVS2 196 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 RPL36Q9Y3U8 105 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-216ENST00000581108 A0A0G2JK05 382 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 TMEM212A6NML5 194 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 EBAG9O00559 213 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 ALX3O95076 343 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 CSF1P09603 554 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 TMEM225BP0DP42 221 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 VSIG10L2P0DP72 767 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 ZNF44P15621 663 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 GLIPR1P48060 266 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 GTF2A1P52655 376 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 SMN1Q16637 294 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 KLHL22Q53GT1 634 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 MINOS1Q5TGZ0 78 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 Q6P435 159 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 PARP16Q8N5Y8 322 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 CFHR4Q92496 578 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 CLEC7AQ9BXN2 247 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 RHOFQ9HBH0 211 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 DHDHQ9UQ10 334 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 PCDHGB5Q9Y5G0 923 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 MINOS1-NBL1R4GNA1 71 aa17.15■□□□□ 0.34
CSNK1D-216ENST00000581108 SULT1B1O43704 296 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 BAG2O95816 211 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 CCDC159P0C7I6 412 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 LIMS3P0CW19 117 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 LIMS4P0CW20 117 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 DYNLT3P51808 116 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 ZP1P60852 638 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 SLC34A1Q06495 639 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 MRPL28Q13084 256 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 IL18R1Q13478 541 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 PRAMEF5Q5TYX0 476 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 DTX3Q8N9I9 347 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 NDNFQ8TB73 568 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 TSEN15Q8WW01 171 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 SERTAD4Q9NUC0 356 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 ING3Q9NXR8 418 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 PITPNC1Q9UKF7 332 aa17.14■□□□□ 0.33
CSNK1D-216ENST00000581108 TRGV10A0A0A0MS01 117 aa17.13■□□□□ 0.33
CSNK1D-216ENST00000581108 WBP4O75554 376 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-216ENST00000581108 RPSAP08865 295 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-216ENST00000581108 CDK2P24941 298 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms