RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 LAMA1P25391 3075 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 IGHV2OR16-5A0A0B4J2B6 119 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 IGHV1-18A0A0C4DH31 117 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 A0A0D9SG52 128 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 C5orf51A6NDU8 294 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 TRDCB7Z8K6 153 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 NOS1APO75052 506 aaPredicted RBP9.5□□□□□ -0.89
SKA2-204ENST00000578519 TSC22D2O75157 780 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 NXPH2O95156 264 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 IFNA2P01563 188 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 CD8AP01732 235 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 PET100P0DJ07 73 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 GLI4P10075 376 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 ZNF44P15621 663 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 PPP3CBP16298 524 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 KCNJ3P48549 501 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 ZNF81P51508 661 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 RAB14P61106 215 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 NAAAQ02083 359 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 TSC22D1Q15714 1073 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 SHEQ5VZ18 495 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 KCTD9Q7L273 389 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 OR8H1Q8NGG4 311 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 C1QTNF6Q9BXI9 259 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 METTL8Q9H825 291 aaKnown RBP9.5□□□□□ -0.89
SKA2-204ENST00000578519 NGBQ9NPG2 151 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 ZFP57Q9NU63 452 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 DECR2Q9NUI1 292 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 RASL12Q9NYN1 266 aa9.5□□□□□ -0.89
SKA2-204ENST00000578519 FBXO9Q9UK97 447 aaPredicted RBP9.5□□□□□ -0.89
SKA2-204ENST00000578519 PLSCR5A0PG75 271 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 A8MXE2 369 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 M0R1B8 84 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 LCE2BO14633 110 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 SYNGR1O43759 233 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 ATP6V1G1O75348 118 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 WISP2O76076 250 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 TOXO94900 526 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 SFTPCP11686 197 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 SLC25A4P12235 298 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 GLRXP35754 106 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 SRPXP78539 464 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 AADACL3Q5VUY0 350 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 TMEM65Q6PI78 240 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 DOLPP1Q86YN1 238 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 ZNF565Q8N9K5 539 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 SUMF2Q8NBJ7 301 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 POC1AQ8NBT0 407 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 SCCPDHQ8NBX0 429 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 ADAD2Q8NCV1 583 aaKnown RBP9.49□□□□□ -0.89
SKA2-204ENST00000578519 OR4A4PQ8NGN8 299 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 MAFIPQ8WZ33 124 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 LRRC46Q96FV0 321 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 DPCDQ9BVM2 203 aaPredicted RBP9.49□□□□□ -0.89
SKA2-204ENST00000578519 SUCNR1Q9BXA5 334 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 NMES1Q9C002 83 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 C5orf66Q9H5L9 145 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 Q9N2K0 584 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 PLSCR3Q9NRY6 295 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 CA10Q9NS85 328 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 PCDHB10Q9UN67 800 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 ZNF835Q9Y2P0 537 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 ATP23Q9Y6H3 246 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 COL6A3P12111 3177 aa9.49□□□□□ -0.89
SKA2-204ENST00000578519 USP34Q70CQ2 3546 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ZNF407Q9C0G0 2248 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 FXYD6-FXYD2A0A087WZ82 144 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 OR5H14A6NHG9 310 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 FAM25EA8MYX2 175 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 EEF1E1-BLOC1S5C9J1V9 151 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 C16orf97H3BN30 126 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 K7EM74 188 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ZNHIT1O43257 154 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 B3GALNT1O75752 331 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 SIX6O95475 246 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 NAPSAO96009 420 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 RLN2P04090 185 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 GRPP07492 148 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 PGA5P0DJD9 388 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 RPA2P15927 270 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 TNFSF4P23510 183 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 S100A11P31949 105 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 FCGR2CP31995 323 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 FABP6P51161 128 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ZNF83P51522 516 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 TDGF1P3P51864 188 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 OPCMLQ14982 345 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 LGALSLQ3ZCW2 172 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 ESCO2Q56NI9 601 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 PAN3Q58A45 887 aaKnown RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 LAMTOR1Q6IAA8 161 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ZNF474Q6S9Z5 364 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 TMEM108Q6UXF1 575 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 CLEC18BQ6UXF7 455 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 C17orf107Q6ZR85 190 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 INO80EQ8NBZ0 244 aaPredicted RBP9.48□□□□□ -0.89
SKA2-204ENST00000578519 OR5T2Q8NGG2 359 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 OR10Z1Q8NGY1 313 aa9.48□□□□□ -0.89
SKA2-204ENST00000578519 LILRB1Q8NHL6 650 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms