RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 LPAR5Q9H1C0 372 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 MIXL1Q9H2W2 232 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 ELL3Q9HB65 397 aaPredicted RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 UFSP2Q9NUQ7 469 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RHBDL2Q9NX52 303 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RABL2AQ9UBK7 228 aaPredicted RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 RABL2BQ9UNT1 228 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 PLEKHA6Q9Y2H5 1048 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 APCP25054 2843 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 A0A1W2PP11 408 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 F8VVB4 439 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 F8VWA3 439 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 TMEM178BH3BS89 294 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 RAB27BO00194 218 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 HPGDSO60760 199 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RP2O75695 350 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 CRTAPO75718 401 aaPredicted RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 PLATP00750 562 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 KNG1P01042 644 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 BCL3P20749 454 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 CPT2P23786 658 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 LMO1P25800 156 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 TNFSF8P32971 234 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 S100A5P33763 92 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 IL13RA2Q14627 380 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 HFEQ30201 348 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 UBE2NLQ5JXB2 153 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 TEX36Q5VZQ5 186 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 METAP1DQ6UB28 335 aaPredicted RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 CMTM4Q8IZR5 234 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 SAMD12Q8N8I0 201 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 SLC25A38Q96DW6 304 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 CCL19Q99731 98 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 TMEM59Q9BXS4 323 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 TMEM106BQ9NUM4 274 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 RBFOX1Q9NWB1 397 aaKnown RBP6.72□□□□□ -1.33
COPS3-215ENST00000578317 ST3GAL6Q9Y274 331 aa6.72□□□□□ -1.33
COPS3-215ENST00000578317 CSMD1Q96PZ7 3565 aa6.71□□□□□ -1.33
COPS3-215ENST00000578317 IGHV3-64DA0A0J9YX35 117 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 hCG_1807616A0A1W2PRN6 198 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.34
COPS3-215ENST00000578317 RGS5O15539 181 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 XRCC3O43542 346 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 NXPH2O95156 264 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 GLAP06280 429 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 MUC1P15941 1255 aaPredicted RBP6.71□□□□□ -1.34
COPS3-215ENST00000578317 ELK1P19419 428 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 GLRA1P23415 457 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 COL8A2P25067 703 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 PTBP1P26599 531 aaKnown RBP eCLIP6.71□□□□□ -1.34
COPS3-215ENST00000578317 MNDAP41218 407 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 EFNB2P52799 333 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 TMEM50BP56557 158 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 RBM11P57052 281 aaKnown RBP6.71□□□□□ -1.34
COPS3-215ENST00000578317 PLA2G7Q13093 441 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 ARL6IP1Q15041 203 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 SPIN3Q5JUX0 258 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 ATPAF1Q5TC12 328 aaPredicted RBP6.71□□□□□ -1.34
COPS3-215ENST00000578317 ACP7Q6ZNF0 438 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 CCDC190Q86UF4 302 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 OR56B1Q8NGI3 324 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 OR10K1Q8NGX5 313 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 LRRC29Q8WV35 223 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 CCL17Q92583 94 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 FAM46BQ96A09 425 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 ZNF488Q96MN9 340 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 GAL3ST1Q99999 423 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 SELENOIQ9C0D9 397 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 BANF2Q9H503 90 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 SPACA1Q9HBV2 294 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 MYOZ1Q9NP98 299 aaPredicted RBP6.71□□□□□ -1.34
COPS3-215ENST00000578317 DIABLOQ9NR28 239 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 NAV2Q8IVL1 2488 aa6.71□□□□□ -1.34
COPS3-215ENST00000578317 ABCA12Q86UK0 2595 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 PPIAL4EA0A075B759 164 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 TRAV38-1A0A0B4J264 116 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 PPIAL4DF5H284 164 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 LGALS8O00214 317 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 TNFRSF13BO14836 293 aaPredicted RBP6.7□□□□□ -1.34
COPS3-215ENST00000578317 NDUFA2O43678 99 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 EIF4EP06730 217 aaKnown RBP6.7□□□□□ -1.34
COPS3-215ENST00000578317 MELTFP08582 738 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 PPIAL4FP0DN26 164 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 DAOP14920 347 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 PRKACAP17612 351 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 SERPINA2P20848 420 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 TALDO1P37837 337 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 NR4A2P43354 598 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 PITPNBP48739 271 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 TAF9Q16594 264 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 MICBQ29980 383 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 SMIM21Q3B7S5 101 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 FIP1L1Q6UN15 594 aaKnown RBP6.7□□□□□ -1.34
COPS3-215ENST00000578317 BIVMQ86UB2 503 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 LAX1Q8IWV1 398 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 Q8N3U1 123 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 DTX3Q8N9I9 347 aa6.7□□□□□ -1.34
COPS3-215ENST00000578317 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms