RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 IAPPP10997 89 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 BMP5P22003 454 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 KIRREL1Q96J84 757 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 IP6K3Q96PC2 410 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 GPR27Q9NS67 375 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 NECAP2Q9NVZ3 263 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
NDEL1-204ENST00000578172 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 YIF1AO95070 293 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 SCAF4O95104 1147 aaKnown RBP11.88□□□□□ -0.51
NDEL1-204ENST00000578172 IFNA4P05014 189 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 CD63P08962 238 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 SLC25A4P12235 298 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF708P17019 499 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 OSR2Q8N2R0 312 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 SLC30A7Q8NEW0 376 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 ABHD14AQ9BUJ0 271 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 DEFB127Q9H1M4 99 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 MOB1AQ9H8S9 216 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 LRFN1Q9P244 771 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 RNF150Q9ULK6 438 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 NR2C1P13056 603 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 HGFACQ04756 655 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 MEGF10Q96KG7 1140 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 RHOVQ96L33 236 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 EDEM2Q9BV94 578 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 TOLLIPQ9H0E2 274 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 RAB18Q9NP72 206 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 LUZP4Q9P127 313 aa11.88□□□□□ -0.51
NDEL1-204ENST00000578172 C9JQL5 133 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 SUCLG1P53597 346 aaKnown RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 SUMO3P55854 103 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 B2MP61769 119 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 CALHM1Q8IU99 346 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 OR2G3Q8NGZ4 309 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 HAS2Q92819 552 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 POM121Q96HA1 1249 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 SLC2A9Q9NRM0 540 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 PPP1R3CQ9UQK1 317 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 EIF1BO60739 113 aaKnown RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 IFI6P09912 130 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 QRFPP83859 136 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 HOXA4Q00056 320 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 PSG4Q00888 419 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 DPPA2Q7Z7J5 298 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 UBAC2Q8NBM4 344 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 OR10AD1Q8NGE0 317 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 FAM212BQ9NTI7 297 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 NKX2-6A6NCS4 301 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF705DP0CH99 300 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF705BP0CI00 300 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 HKR1P10072 659 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 LIFP15018 202 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 ARF1P84077 181 aaKnown RBP11.87□□□□□ -0.51
NDEL1-204ENST00000578172 PCOLCEQ15113 449 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 IL22RA1Q8N6P7 574 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 NRIP2Q9BQI9 281 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 FAM117AQ9C073 453 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 CHST5Q9GZS9 411 aa11.87□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF587BE7ETH6 402 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 IGHMP01871 453 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 THBS4P35443 961 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 C17orf82Q86X59 251 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 FAM234AQ9H0X4 552 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 LIME1Q9H400 295 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 BOD1L1Q8NFC6 3051 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 WDR1O75083 606 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 MBPP02686 304 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 NTF4P34130 210 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 PPP1CCP36873 323 aaKnown RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 CYB561P49447 251 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 RNF212Q495C1 297 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 RPUSD3Q6P087 351 aaKnown RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 DHRS11Q6UWP2 260 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 KMT5CQ86Y97 462 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 SKA3Q8IX90 412 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 FRZBQ92765 325 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 EXTL1Q92935 676 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF251Q9BRH9 671 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 HEATR1Q9H583 2144 aaKnown RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 SERPINE3A8MV23 424 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF732B4DXR9 585 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 ST8SIA3O43173 380 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms