RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ORM1P02763 201 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 IGHV4-34P06331 123 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 CTSLP07711 333 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 MYL2P10916 166 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TDGF1P13385 188 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF35P13682 527 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ATP1B2P14415 290 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 KITLGP21583 273 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 PSMA1P25786 263 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ADORA2BP29275 332 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 S100GP29377 79 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 IL12AP29459 219 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 APLNRP35414 380 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SGSHP51688 502 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ACLYP53396 1101 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ARPP19P56211 112 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TBPL1P62380 186 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 DCDP81605 110 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 CDK6Q00534 326 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 C2orf80Q0P641 193 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 FABP9Q0Z7S8 132 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB35Q15286 201 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 RSU1Q15404 277 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TAF9Q16594 264 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TATDN3Q17R31 274 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 CEACAM21Q3KPI0 293 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 CYBRD1Q53TN4 286 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SAMD4BQ5PRF9 694 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 C1orf220Q5T0J3 134 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SDHAF4Q5VUM1 108 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM159AQ6UWV7 190 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TMPRSS11AQ6ZMR5 421 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ZFP2Q6ZN57 461 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OLIG3Q7RTU3 272 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC36A1Q7Z2H8 476 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 DOLPP1Q86YN1 238 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 C10orf107Q8IVU9 208 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 UBALD2Q8IYN6 164 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 MMGT1Q8N4V1 131 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ACBD7Q8N6N7 88 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 C20orf203Q8NBC4 194 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR7G2Q8NG99 324 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR4D5Q8NGN0 318 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR13C4Q8NGS5 318 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2Y1Q8NGV0 311 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR4C6Q8NH72 309 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TERB2Q8NHR7 220 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TNFAIP8L1Q8WVP5 186 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM3CQ92520 227 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC7A6Q92536 515 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 HIST1H2BAQ96A08 127 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 RPEQ96AT9 228 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 REEP6Q96HR9 211 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SMIM8Q96KF7 97 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TEX37Q96LM6 180 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ZFP3Q96NJ6 502 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR52E6Q96RD3 313 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SORT1Q99523 831 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 P2RX4Q99571 388 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 MFSD1Q9H3U5 465 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SAR1AQ9NR31 198 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 INPP5EQ9NRR6 644 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TAS2R13Q9NYV9 303 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 VPS29Q9UBQ0 182 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF230Q9UIE0 474 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 NPIPA1Q9UND3 350 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 C14orf166Q9Y224 244 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SPEF2Q9C093 1822 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 PRXQ9BXM0 1461 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TTC37Q6PGP7 1564 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 NAIPQ13075 1403 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ANKRD50Q9ULJ7 1429 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 AK9Q5TCS8 1911 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A087WX48 190 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A0J9YXY3 114 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 KBTBD11-OT1A0A1B0GTJ5 212 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM72A0PK05 275 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF726A6NNF4 738 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 C1orf196B1AJZ1 125 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 PPP5D1E7EU14 171 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 PDE6DO43924 150 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 GNG7O60262 68 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC19A2O60779 497 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 FCN3O75636 299 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 PIAS1O75925 651 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 IFNA7P01567 189 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 BCHEP06276 602 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 HIST1H1EP10412 219 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF43P17038 809 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 KDELR1P24390 212 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RPS12P25398 132 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 IVDP26440 423 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 BRS3P32247 399 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 DNASE1L1P49184 302 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 PRLHRP49683 370 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ATP1B3P54709 279 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR10A3P58181 314 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 SNRPD2P62316 118 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 BTG2P78543 158 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 CDK5Q00535 292 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms