RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CLDN23Q96B33 292 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A1W2PQD3 144 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 VEGFBP49765 207 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 RAB35Q15286 201 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 BSCL2Q96G97 398 aaPredicted RBP11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 RTL8AQ9BWD3 113 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 POLDIP2Q9Y2S7 368 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 MSGN1A6NI15 193 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 HSBP1O75506 76 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 PPYP01298 95 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 ERVFC1-1P60608 527 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 SLC10A1Q14973 349 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 MRGPRGQ86SM5 289 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 THOC3Q96J01 351 aaKnown RBP11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 IGHV5-51A0A0C4DH38 117 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 SH2D1BO14796 132 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZIC2O95409 532 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 KLK2P20151 261 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 RPS16P62249 146 aaKnown RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 CEACAM16Q2WEN9 425 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 LSRQ86X29 649 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 GPBAR1Q8TDU6 330 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 STARD10Q9Y365 291 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 PARP14Q460N5 1801 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 H0YL77 283 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 FBP1P09467 338 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 EXT1Q16394 746 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ACER2Q5QJU3 275 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 RABEPKQ7Z6M1 372 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 AGBL5Q8NDL9 886 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR10G4Q8NGN3 311 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR10G9Q8NGN4 311 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR10G7Q8NGN6 311 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 HDHD3Q9BSH5 251 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 CLCF1Q9UBD9 225 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A096LPE4 126 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 IGHV3-64DA0A0J9YX35 117 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A1W2PPC4 97 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A1W2PPZ6 126 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 LMX1BO60663 402 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 PPP1CCP36873 323 aaKnown RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 FABP6P51161 128 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR6X1Q8NH79 312 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ANAPC16Q96DE5 110 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 TM4SF19Q96DZ7 209 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 SPACA9Q96E40 222 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 GDF15Q99988 308 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 LRRC61Q9BV99 259 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 RGPD3A6NKT7 1758 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 RGPD4Q7Z3J3 1758 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 TRAV34A0A0B4J273 112 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A1B0GTQ1 180 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 SYNGR2O43760 224 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 PRF1P14222 555 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 GPM6AP51674 278 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ARG2P78540 354 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF816Q0VGE8 651 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 PLAC9Q5JTB6 97 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR5B3Q8NH48 314 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 SLC25A28Q96A46 364 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 UTP23Q9BRU9 249 aaKnown RBP11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF391Q9UJN7 358 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 CABIN1Q9Y6J0 2220 aa11.55□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF729A6NN14 1252 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 TERTO14746 1132 aaKnown RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 TNFSF11O14788 317 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 PRSS12P56730 875 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 HABP2Q14520 560 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 APH1AQ96BI3 265 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 FOXB1Q99853 325 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 LANCL2Q9NS86 450 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 PISDQ9UG56 409 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 NAT8BQ9UHF3 227 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 CXorf65A6NEN9 183 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 FCN1O00602 326 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 RPLP1P05386 114 aaKnown RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 RUNX1Q01196 453 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR7C2O60412 319 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 HSPB1P04792 205 aaKnown RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 DANCRP0C864 163 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR10J1P30954 320 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 CEBPEQ15744 281 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF774Q6NX45 483 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 NUFIP2Q7Z417 695 aaKnown RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 REC114Q7Z4M0 266 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 SLC35E3Q7Z769 313 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 RBMXL3Q8N7X1 1067 aaKnown RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNRF4Q8WWF5 429 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 LIPT2A6NK58 231 aa11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 KIAA1324LA8MWY0 1029 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB3-201ENST00000576222 TRDCB7Z8K6 153 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms