RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BLMHQ13867 455 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 IL13RA2Q14627 380 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 NEDD8Q15843 81 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 SSX1Q16384 188 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 SLC22A6Q4U2R8 563 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 FAM27D1Q5T7N8 215 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 SYT6Q5T7P8 510 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 TMEM91Q6ZNR0 172 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 LINC00596Q86U02 117 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR8H2Q8N162 312 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 OSR2Q8N2R0 312 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 Q8NFD4 153 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR51T1Q8NGJ9 327 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 MUL1Q969V5 352 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 MRPS24Q96EL2 167 aaKnown RBP10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 NR1H4Q96RI1 486 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 ZNF696Q9H7X3 374 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 ONECUT1Q9UBC0 465 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 KPTNQ9Y664 436 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 H3BUI4 141 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 SIRPB1O00241 398 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 PDCD5O14737 125 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 ZNF737O75373 536 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR2H2O95918 312 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 UBBP0CG47 229 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 CALCBP10092 127 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 MYL9P24844 172 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUSP1P28562 367 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 ARF6P62330 175 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 SCN1BQ07699 218 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 PDCD1Q15116 288 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 GRK1Q15835 563 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 GLIPR1L1Q6UWM5 242 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 FAM185AQ8N0U4 392 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 KIR3DL3Q8N743 410 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 LY6G5BQ8NDX9 201 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR10K1Q8NGX5 313 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 WDFY2Q96P53 400 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 CST11Q9H112 138 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 IL36RNQ9UBH0 155 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 OPN4Q9UHM6 478 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 SSR3Q9UNL2 185 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 ST3GAL6Q9Y274 331 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 ZFHX3Q15911 3703 aa10.55□□□□□ -0.72
TRAPPC1-206ENST00000573989 M0R1W7 72 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 MGST3O14880 152 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 FCN3O75636 299 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 AVPP01185 164 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 ADRA2CP18825 462 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 FPR2P25090 351 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 LMO1P25800 156 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 HTR2CP28335 458 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 GP2P55259 537 aaKnown RBP10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 EDDM3BP56851 147 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 BPIFB3P59826 476 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 TIMM50Q3ZCQ8 353 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 NHLRC3Q5JS37 347 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 GPR157Q5UAW9 335 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 CD200R1LQ6Q8B3 271 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 C1orf122Q6ZSJ8 110 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 LRRTM1Q86UE6 522 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 FGFRL1Q8N441 504 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR6M1Q8NGM8 313 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 UPRTQ96BW1 309 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 NKX3-1Q99801 234 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 PCGF1Q9BSM1 259 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 PLGRKTQ9HBL7 147 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 NUP50Q9UKX7 468 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 STUB1Q9UNE7 303 aa10.54□□□□□ -0.72
TRAPPC1-206ENST00000573989 TRAV1-2A0A0B4J238 106 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 hADV38S2A0JD32 116 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 CRTAPO75718 401 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 CSN2P05814 226 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 ERP29P30040 261 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 FGF9P31371 208 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 KCNJ3P48549 501 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 RBM11P57052 281 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 MEF2CQ06413 473 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 MPV17LQ2QL34 196 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 C1orf100Q5SVJ3 147 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 Q6P435 159 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 C17orf107Q6ZR85 190 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 C1orf229Q6ZS94 237 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR4D6Q8NGJ1 314 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 CHST6Q9GZX3 395 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 PPIL3Q9H2H8 161 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 METTL8Q9H825 291 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 SPACA1Q9HBV2 294 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 V9GY05 133 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 SVEP1Q4LDE5 3571 aa10.53□□□□□ -0.72
TRAPPC1-206ENST00000573989 TRAV40A0A0B4J280 105 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 A0A0G2JK05 382 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
TRAPPC1-206ENST00000573989 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms