RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 G6PC2Q9NQR9 355 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 V9GYH0 126 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 PRUNE2Q8WUY3 3088 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 IGHV2OR16-5A0A0B4J2B6 119 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 CD3DP04234 171 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 NAT2P11245 290 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 BCL3P20749 454 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 GPR6P46095 362 aaPredicted RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 ESCO2Q56NI9 601 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 DMBX1Q8NFW5 382 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 DIRC2Q96SL1 478 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 HSD17B6O14756 317 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 ISG15P05161 165 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 RPA2P15927 270 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 FCGR2CP31995 323 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 ERVS71-1P61550 626 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 ZNF826PQ6ZT77 177 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 OR5D13Q8NGL4 314 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 PGLYRP3Q96LB9 341 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 SLC25A21Q9BQT8 299 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 MIXL1Q9H2W2 232 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 OR51J1Q9H342 316 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 ONECUT1Q9UBC0 465 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 FAM96BQ9Y3D0 163 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 GEMIN2O14893 280 aaKnown RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 CTAG2O75638 210 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 HRH1P35367 487 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 FGL1Q08830 312 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 PNLIPRP3Q17RR3 467 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 C12orf45Q8N5I9 185 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 ZNF524Q96C55 264 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 PPIAL4EA0A075B759 164 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 RFPL4AA6NLU0 287 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 PPIAL4DF5H284 164 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 RFPL4AL1F8VTS6 287 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 J3QW42 95 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 SULT1C2O00338 296 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 TCRBP04435 133 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 CD1AP06126 327 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 PPIAL4FP0DN26 164 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 LUMP51884 338 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 S1PR3Q99500 378 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 HRASLSQ9HDD0 168 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 ZDHHC8Q9ULC8 765 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 RNF150Q9ULK6 438 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 PPIAL4AQ9Y536 164 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 TRANK1O15050 2925 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 IGHV3OR15-7A0A075B7D8 119 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 ETV2O00321 342 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 SLC33A1O00400 549 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 RAB6AP20340 208 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 APOBEC3AP31941 199 aaPredicted RBP8.72□□□□□ -1.01
SMG6-213ENST00000573166 GPR12P47775 334 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 SCAND1P57086 179 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 FAAP20Q6NZ36 180 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 CLEC2AQ6UVW9 174 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 RPRMLQ8N4K4 120 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 TCTEX1D2Q8WW35 142 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 EDARADDQ8WWZ3 215 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 MED30Q96HR3 178 aa8.72□□□□□ -1.01
SMG6-213ENST00000573166 hADV38S2A0JD32 116 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 PYCARD-AS1I3L0S3 204 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 GOSR2O14653 212 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 PHF1O43189 567 aaPredicted RBP8.71□□□□□ -1.01
SMG6-213ENST00000573166 CEACAM4O75871 244 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 HAND1O96004 215 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 VSIG8P0DPA2 414 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 OR4S1Q8NGB4 309 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 SMIM4Q8WVI0 70 aa8.71□□□□□ -1.01
SMG6-213ENST00000573166 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.01
SMG6-213ENST00000573166 PLCE1Q9P212 2302 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 TRBV5-5A0A0J9YX44 114 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 B9A039 149 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 M0R036 132 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 PLA2G10O15496 165 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 SOCS1O15524 211 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 SMPD2O60906 423 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 IFNA17P01571 189 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
SMG6-213ENST00000573166 USF2Q15853 346 aaPredicted RBP8.71□□□□□ -1.02
SMG6-213ENST00000573166 PIGYQ3MUY2 71 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 FDX2Q6P4F2 183 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 NHLRC1Q6VVB1 395 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 POM121L2Q96KW2 1035 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 LSM5Q9Y4Y9 91 aaKnown RBP8.71□□□□□ -1.02
SMG6-213ENST00000573166 RPL36A-HNRNPH2H7BZ11 118 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 SC5DO75845 299 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 APOA2P02652 100 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 CD80P33681 288 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 ATP5J2P56134 94 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 RRAS2P62070 204 aaPredicted RBP8.71□□□□□ -1.02
SMG6-213ENST00000573166 MSMO1Q15800 293 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 ZBTB37Q5TC79 503 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 OR52W1Q6IF63 320 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 IGFL2Q6UWQ7 119 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 OR8B3Q8NGG8 313 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 FGFBP3Q8TAT2 258 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 MRGPRDQ8TDS7 321 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms