RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 TAAR5O14804 337 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 FGF16O43320 207 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 NAPSAO96009 420 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 WNT5AP41221 380 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 NUBP1P53384 320 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 IAH1Q2TAA2 248 aaPredicted RBP13.98□□□□□ -0.17
POLR2A-201ENST00000572844 IGFL2Q6UWQ7 119 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 TFAP2EQ6VUC0 442 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 CCDC36Q8IYA8 594 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 RTN4IP1Q8WWV3 396 aaPredicted RBP13.98□□□□□ -0.17
POLR2A-201ENST00000572844 C12orf49Q9H741 205 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 MTCH1Q9NZJ7 389 aa13.98□□□□□ -0.17
POLR2A-201ENST00000572844 B8ZZF3 427 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 FTH1P19P0C7X4 201 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 HIKESHIQ53FT3 197 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 FAM74A1Q5RGS3 127 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 IGF2-ASQ6U949 168 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 ZNF573Q86YE8 665 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 FAM185AQ8N0U4 392 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 CCDC71LQ8N9Z2 235 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 TOMM40LQ969M1 308 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 C1QTNF6Q9BXI9 259 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 RHOFQ9HBH0 211 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 SPACA1Q9HBV2 294 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 ASCL3Q9NQ33 180 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 TMEM100Q9NV29 134 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 CACNA1HO95180 2353 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 FAM221AA4D161 298 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 LRP3O75074 770 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 GLAP06280 429 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 EIF5AP63241 154 aaKnown RBP13.97□□□□□ -0.17
POLR2A-201ENST00000572844 FAM209AQ5JX71 171 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 GGNBP1Q5YKI7 109 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 UNQ6126/PRO20091Q6UXV3 157 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 PKIBQ9C010 78 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 SLC5A7Q9GZV3 580 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 RIMS4Q9H426 269 aaPredicted RBP13.97□□□□□ -0.17
POLR2A-201ENST00000572844 Q9N2K0 584 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 PARD6AQ9NPB6 346 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 SLC2A9Q9NRM0 540 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 GSKIPQ9P0R6 139 aa13.97□□□□□ -0.17
POLR2A-201ENST00000572844 MSGN1A6NI15 193 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 HERV-K104P61576 105 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 GNG3P63215 75 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 PDCD1Q15116 288 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 LIAT1Q6ZQX7 453 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 MDP1Q86V88 176 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 BHLHE23Q8NDY6 225 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 CLCF1Q9UBD9 225 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 GLS2Q9UI32 602 aa13.96□□□□□ -0.17
POLR2A-201ENST00000572844 H7C1Q1 480 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 KCNAB3O43448 404 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 IL24Q13007 206 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 IL13RA2Q14627 380 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 TBC1D28Q2M2D7 210 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 STPG2Q8N412 459 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 DEFB124Q8NES8 71 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 MRPL24Q96A35 216 aaKnown RBP13.95□□□□□ -0.18
POLR2A-201ENST00000572844 CCDC120Q96HB5 630 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 PIGMQ9H3S5 423 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 ZNF629Q9UEG4 869 aaPredicted RBP13.95□□□□□ -0.18
POLR2A-201ENST00000572844 TRBV6-6A0A0A6YYG2 114 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 ZSCAN5BA6NJL1 495 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 DEDDO75618 318 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 PPYP01298 95 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 OR5AC1P0C628 307 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 AADACP22760 399 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 FXYD4P59646 89 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 S100A10P60903 97 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 SMCO1Q147U7 214 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 TUSC1Q2TAM9 212 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 FBXW12Q6X9E4 464 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 P4HA3Q7Z4N8 544 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 LGI3Q8N145 548 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 IFT22Q9H7X7 185 aa13.95□□□□□ -0.18
POLR2A-201ENST00000572844 KIR2DS1A0A191URI9 304 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 NUDT19A8MXV4 375 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 NKX2-8O15522 239 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 CTXN2P0C2S0 81 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 HKR1P10072 659 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
POLR2A-201ENST00000572844 ZNF14P17017 642 aaPredicted RBP13.94□□□□□ -0.18
POLR2A-201ENST00000572844 KIR2DS4P43632 304 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 RND3P61587 244 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 SRPXP78539 464 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 TGFBR3Q03167 851 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 KIR2DS1Q14954 304 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 UQCC3Q6UW78 93 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 TMPRSS7Q7RTY8 843 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 RNF141Q8WVD5 230 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 MSI2Q96DH6 328 aaKnown RBP13.94□□□□□ -0.18
POLR2A-201ENST00000572844 SHANK1Q9Y566 2161 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 RAB19A4D1S5 217 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 CNOT4O95628 575 aaKnown RBP13.94□□□□□ -0.18
POLR2A-201ENST00000572844 MRPL49Q13405 166 aaKnown RBP13.94□□□□□ -0.18
POLR2A-201ENST00000572844 GUSBP1Q15486 140 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 ZNF585AQ6P3V2 769 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 GALNT11Q8NCW6 608 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms