RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FBP1P09467 338 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 DBTP11182 482 aaKnown RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 ZNF20P17024 532 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ATF1P18846 271 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 MDKP21741 143 aaPredicted RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 PRKACBP22694 351 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 MTCP1P56278 107 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 LINC00310P59036 64 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ACTA2P62736 377 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 RPL31P62899 125 aaKnown RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 ACTG2P63267 376 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 COL10A1Q03692 680 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ZNF91Q05481 1191 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ACSM1Q08AH1 577 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 RAB40BQ12829 278 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 KLRD1Q13241 179 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ALKBH1Q13686 389 aaKnown RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 NCR3LG1Q68D85 454 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 SLC25A26Q70HW3 274 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 UTS2BQ765I0 119 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 MKXQ8IYA7 352 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 SYS1Q8N2H4 156 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 PNKDQ8N490 385 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 C11orf42Q8N5U0 333 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ZNF555Q8NEP9 628 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 OR5AN1Q8NGI8 311 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 DYRK2Q92630 601 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 STMN2Q93045 179 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ADAT3Q96EY9 351 aaPredicted RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 PELI1Q96FA3 418 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 C4orf36Q96KX1 117 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 CEP19Q96LK0 163 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ALG8Q9BVK2 526 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 FAM234AQ9H0X4 552 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 SLITRK2Q9H156 845 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 HEXA-AS1Q9H8Q6 139 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 ISG20L2Q9H9L3 353 aaKnown RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 BEX1Q9HBH7 125 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 C19orf12Q9NSK7 152 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 MRPS18AQ9NVS2 196 aaKnown RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 C1RLQ9NZP8 487 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 RPL36Q9Y3U8 105 aaKnown RBP6.07□□□□□ -1.44
NUP88-205ENST00000572809 MMP24Q9Y5R2 645 aa6.07□□□□□ -1.44
NUP88-205ENST00000572809 IGKV1-9A0A0C4DH69 117 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 CLPSL1A2RUU4 121 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 BTBD17A6NE02 478 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 OR4C45A6NMZ5 311 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 GPR137BO60478 399 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 NDUFA7O95182 113 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 RPSAP08865 295 aaKnown RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 OCM2P0CE71 109 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 OCMP0CE72 109 aaPredicted RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 AZGP1P25311 298 aaKnown RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 SAA4P35542 130 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 NPBWR2P48146 333 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 GBX2P52951 348 aaPredicted RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 RPL15P61313 204 aaKnown RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 MRPL28Q13084 256 aaKnown RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 MIDNQ504T8 468 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 LPCAT4Q643R3 524 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 HCP5Q6MZN7 132 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 GDPGP1Q6ZNW5 385 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 GDPD3Q7L5L3 318 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 SERPINA12Q8IW75 414 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 Q8IYB0 196 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 FAM58AQ8N1B3 248 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 ZNF676Q8N7Q3 588 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 ASCC1Q8N9N2 400 aaKnown RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 OR51A4Q8NGJ6 313 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 OR52I1Q8NGK6 324 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 OR13C3Q8NGS6 347 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 OR10AC1Q8NH08 325 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 OR4F5Q8NH21 305 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 EMG1Q92979 244 aaKnown RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 SNX22Q96L94 193 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 RDH12Q96NR8 316 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 ZNF649Q9BS31 505 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 ZCCHC4Q9H5U6 513 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 SEBOXQ9HB31 216 aaPredicted RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 NEK6Q9HC98 313 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 INPP5EQ9NRR6 644 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 SMPD3Q9NY59 655 aaPredicted RBP6.06□□□□□ -1.44
NUP88-205ENST00000572809 ZNRD1Q9P1U0 126 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 SCOCQ9UIL1 159 aa6.06□□□□□ -1.44
NUP88-205ENST00000572809 C17orf98A8MV24 154 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 E9PI62 339 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 SPRY1O43609 319 aaPredicted RBP6.05□□□□□ -1.44
NUP88-205ENST00000572809 ANGPTL7O43827 346 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 ZNF737O75373 536 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 MT-ND2P03891 347 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 PIPP12273 146 aaPredicted RBP6.05□□□□□ -1.44
NUP88-205ENST00000572809 CCL3L1P16619 93 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 BCL3P20749 454 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 PEX2P28328 305 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 POU3F4P49335 361 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 RAG2P55895 527 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 EDDM3BP56851 147 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms