RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 BEX1Q9HBH7 125 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 DYNLRB1Q9NP97 96 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 IL1RAPQ9NPH3 570 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 ACOT13Q9NPJ3 140 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 POLE4Q9NR33 117 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MS4A12Q9NXJ0 267 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 BABAM2Q9NXR7 383 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 NUFIP1Q9UHK0 495 aaKnown RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 NSG2Q9Y328 171 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 DNAH1Q9P2D7 4330 aa4.34□□□□□ -1.72
SF3B3-214ENST00000572365 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 TRBV4-1A0A0J9YWV2 114 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 ZNF879B4DU55 563 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 K7EIL1 84 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 M0R233 179 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 SLC28A1O00337 649 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 IMPA2O14732 288 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 LYPLA1O75608 230 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-214ENST00000572365 SCELO95171 688 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 UTS2O95399 124 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 PTBP3O95758 552 aaKnown RBP4.33□□□□□ -1.72
SF3B3-214ENST00000572365 SERPINA1P01009 418 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 IFNGP01579 166 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 AMBPP02760 352 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 CRYBA1P05813 215 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 C2P06681 752 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 IFI30P13284 250 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
SF3B3-214ENST00000572365 COX5AP20674 150 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 ELK4P28324 431 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 GTF2E2P29084 291 aaKnown RBP4.33□□□□□ -1.72
SF3B3-214ENST00000572365 SLC1A3P43003 542 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 MAGEA3P43357 314 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 TAS2R60P59551 318 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 PPP3R1P63098 170 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 IL5RAQ01344 420 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 CD47Q08722 323 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 TRAM2Q15035 370 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR4D1Q15615 310 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 TATDN3Q17R31 274 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 NDUFAF6Q330K2 333 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 FFAR4Q5NUL3 377 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 PRAMEF8Q5VWM4 474 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 RPL13AP3Q6NVV1 102 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 DHRS11Q6UWP2 260 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 ZCCHC23Q6ZST2 131 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 WDFY1Q8IWB7 410 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 PDZD9Q8IXQ8 264 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 SVBPQ8N300 66 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 C9orf62Q8N4C0 152 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 TMEM99Q8N816 258 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR4M2Q8NGB6 313 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR4A15Q8NGL6 344 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR6M1Q8NGM8 313 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR9A2Q8NGT5 310 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR52B2Q96RD2 323 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 RBBP8Q99708 897 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 MRPL57Q9BQC6 102 aaKnown RBP4.33□□□□□ -1.72
SF3B3-214ENST00000572365 GINS4Q9BRT9 223 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 TBL1XR1Q9BZK7 514 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 C20orf27Q9GZN8 174 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OR51V1Q9H2C8 321 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 MIXL1Q9H2W2 232 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 GORASP2Q9H8Y8 452 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 MYOZ1Q9NP98 299 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-214ENST00000572365 PLSCR3Q9NRY6 295 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 MED17Q9NVC6 651 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 SDHAF2Q9NX18 166 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 CD274Q9NZQ7 290 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 CES1P1Q9UKY3 287 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 OARD1Q9Y530 152 aa4.33□□□□□ -1.72
SF3B3-214ENST00000572365 IRGMA1A4Y4 181 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CLPSL1A2RUU4 121 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 FABP12A6NFH5 140 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 MFSD2BA6NFX1 497 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 ACOD1A6NK06 481 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 INMT-MINDY4F8WBC2 141 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 H0YL77 283 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 L7N2F9 121 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 PRKYO43930 277 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CYTIPO60759 359 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 STK16O75716 305 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 NUDT14O95848 222 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SERPINA5P05154 406 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 ACSM4P0C7M7 580 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CLUP10909 449 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 FOLR2P14207 255 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SPNP16150 400 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CSNK2A2P19784 350 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 PVALBP20472 110 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 PSMA1P25786 263 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 POLR2IP36954 125 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 RPL35P42766 123 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 RGS6P49758 472 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 PPOXP50336 477 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 RAB5CP51148 216 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GMFBP60983 142 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms