RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 ZNF485Q8NCK3 441 aa16.44■□□□□ 0.22
NUP88-204ENST00000572290 OR51A2Q8NGJ7 313 aa16.44■□□□□ 0.22
NUP88-204ENST00000572290 GHSRQ92847 366 aa16.44■□□□□ 0.22
NUP88-204ENST00000572290 GPER1Q99527 375 aa16.44■□□□□ 0.22
NUP88-204ENST00000572290 hADV38S2A0JD32 116 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 C17orf98A8MV24 154 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 SIRPB1O00241 398 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 MGST3O14880 152 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 OR2H2O95918 312 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 ZNF728P0DKX0 622 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 COX7A1P24310 79 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 DLX6P56179 175 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 ZNF782Q6ZMW2 699 aaPredicted RBP16.43■□□□□ 0.22
NUP88-204ENST00000572290 SATL1Q86VE3 508 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 ZFP41Q8N8Y5 198 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 OR4S1Q8NGB4 309 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 NRG4Q8WWG1 115 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 DYRK2Q92630 601 aa16.43■□□□□ 0.22
NUP88-204ENST00000572290 MEX3AA1L020 520 aaKnown RBP16.42■□□□□ 0.22
NUP88-204ENST00000572290 BTBD17A6NE02 478 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 H0YJX3 145 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 GABRPO00591 440 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 MYL12BO14950 172 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 ZNF44P15621 663 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 C21orf33P30042 268 aaPredicted RBP16.42■□□□□ 0.22
NUP88-204ENST00000572290 OR3A1P47881 315 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 TAS2R43P59537 309 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 PPP3R1P63098 170 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 TPRX1Q8N7U7 411 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 PXT1Q8NFP0 134 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 OR13C5Q8NGS8 318 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 TNFAIP8L1Q8WVP5 186 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 ZNF714Q96N38 554 aa16.42■□□□□ 0.22
NUP88-204ENST00000572290 FBN3Q75N90 2809 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 TRBV5-5A0A0J9YX44 114 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 GPR137BO60478 399 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 RBP4P02753 201 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 ALDOBP05062 364 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 OMGP23515 440 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 LMO1P25800 156 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 ERP29P30040 261 aaKnown RBP16.41■□□□□ 0.22
NUP88-204ENST00000572290 MTNR1BP49286 362 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 BMXP51813 675 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 AQP4P55087 323 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 RPL15P61313 204 aaKnown RBP16.41■□□□□ 0.22
NUP88-204ENST00000572290 SCN1BQ07699 218 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 TAF9Q16594 264 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 YIF1BQ5BJH7 314 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 TCF23Q7RTU1 214 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 BEND2Q8NDZ0 799 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 PGLYRP3Q96LB9 341 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 ZNF747Q9BV97 191 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 TMEM138Q9NPI0 162 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 FKBP14Q9NWM8 211 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 C1RLQ9NZP8 487 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 LINC00312Q9Y6C7 94 aa16.41■□□□□ 0.22
NUP88-204ENST00000572290 POM121CA8CG34 1229 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 MDKP21741 143 aaPredicted RBP16.4■□□□□ 0.22
NUP88-204ENST00000572290 RAG2P55895 527 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 P2RX3P56373 397 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 LGALS4P56470 323 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 WNT4P56705 351 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 Q499Y3 187 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 C6orf141Q5SZD1 244 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 Q6P435 159 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 CHST4Q8NCG5 386 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 OR13D1Q8NGV5 346 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 C17orf50Q8WW18 174 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 FAM192AQ9GZU8 254 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 ERGIC3Q9Y282 383 aa16.4■□□□□ 0.22
NUP88-204ENST00000572290 A0A0G2JK05 382 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 PNMA8CA0A1B0GUJ8 204 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 FUOMA2VDF0 154 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 DEGS1O15121 323 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 NDUFA7O95182 113 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 IGHV1-8P0DP01 117 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 BDKRB2P30411 391 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 RPS11P62280 158 aaKnown RBP eCLIP16.39■□□□□ 0.21
NUP88-204ENST00000572290 DDI2Q5TDH0 399 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 ELP2Q6IA86 826 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 GDPGP1Q6ZNW5 385 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 NANOGP1Q8N7R0 232 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 OR4F5Q8NH21 305 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 OR5R1Q8NH85 324 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 ORAI1Q96D31 301 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 AJUBAQ96IF1 538 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 BEX1Q9HBH7 125 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 VPREB3Q9UKI3 123 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 MMP24Q9Y5R2 645 aa16.39■□□□□ 0.21
NUP88-204ENST00000572290 A0A1B0GUS0 222 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 CDK1P06493 297 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 IGFBP3P17936 291 aaPredicted RBP16.38■□□□□ 0.21
NUP88-204ENST00000572290 ZNF93P35789 620 aaPredicted RBP16.38■□□□□ 0.21
NUP88-204ENST00000572290 PTGFRP43088 359 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 RELBQ01201 579 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 RIPK1Q13546 671 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 RSU1Q15404 277 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 SHISA2Q6UWI4 295 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 ASCL4Q6XD76 172 aa16.38■□□□□ 0.21
NUP88-204ENST00000572290 TRAPPC6BQ86SZ2 158 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms