RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CRYGSP22914 178 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 LBX1P52954 281 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ASCL4Q6XD76 172 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 C1QL4Q86Z23 238 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 OR4D5Q8NGN0 318 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 TECTBQ96PL2 329 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 IL36GQ9NZH8 169 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 NKX2-6A6NCS4 301 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 CLN5O75503 358 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 PPYP01298 95 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 HBE1P02100 147 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 OR8U8P0C7N1 319 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 OMGP23515 440 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ATP6V0CP27449 155 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 TAGLN2P37802 199 aaKnown RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ASCL1P50553 236 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 STARD6P59095 220 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF574Q6ZN55 896 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ZFP62Q8NB50 900 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 SUMF1Q8NBK3 374 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 PIGCQ92535 297 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 TOLLIPQ9H0E2 274 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 KIAA1456Q9P272 454 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ZDHHC8Q9ULC8 765 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 TK1P04183 234 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 LIFP15018 202 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 RGS19P49795 217 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 PCBD1P61457 104 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 RSPO4Q2I0M5 234 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 FAM209BQ5JX69 171 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 HPSE2Q8WWQ2 592 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 ABHD14BQ96IU4 210 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 SF3B5Q9BWJ5 86 aaKnown RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 TMEM222Q9H0R3 208 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 PARPBPQ9NWS1 579 aa9.33□□□□□ -0.92
CCDC40-207ENST00000572253 FOXD3Q9UJU5 478 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 PTRH2Q9Y3E5 179 aaKnown RBP9.33□□□□□ -0.92
CCDC40-207ENST00000572253 TNFSF11O14788 317 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 GPR37O15354 613 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 S100GP29377 79 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 SSR4P51571 173 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 RPS23P62266 143 aaKnown RBP9.32□□□□□ -0.92
CCDC40-207ENST00000572253 RAC1P63000 192 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 HIKESHIQ53FT3 197 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 SLC25A24Q6NUK1 477 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 IGKV1-27A0A075B6S5 117 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 SYNGR3O43761 229 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 SSSCA1O60232 199 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 CD63P08962 238 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 GNRHRP30968 328 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 POLR2GP62487 172 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC40-207ENST00000572253 TLE4Q04727 773 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 EXT1Q16394 746 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF674Q2M3X9 581 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 AKR7LQ8NHP1 331 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 DUSP23Q9BVJ7 150 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 OR6C6A6NF89 314 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 H3BQ15 152 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 MSTNO14793 375 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 DKK1O94907 266 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF32P17041 273 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
CCDC40-207ENST00000572253 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.32□□□□□ -0.92
CCDC40-207ENST00000572253 CPNE4Q96A23 557 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-207ENST00000572253 RARRES2Q99969 163 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 TMEM38BQ9NVV0 291 aa9.32□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF816-ZNF321PA0A0X1KG74 233 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 G3V3Y1 287 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 DNPH1O43598 174 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 ONECUT2O95948 504 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 HAGHQ16775 308 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 AAED1Q7RTV5 226 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 CPT1CQ8TCG5 803 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 NIPSNAP3BQ9BS92 247 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 CRLF2Q9HC73 371 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 CDH23Q9H251 3354 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 A0A0J9YW62 118 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 DUXBA0A1W2PPF3 345 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 IGSF23A1L1A6 192 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 CDRT15L2A8MXV6 281 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
CCDC40-207ENST00000572253 MAS1LP35410 378 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 CCL7P80098 99 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 BAXQ07812 192 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 NCMAPQ5T1S8 102 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF385CQ66K41 422 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-207ENST00000572253 GUSBP11Q6P575 273 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 HEPN1Q6WQI6 88 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF100Q8IYN0 542 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 TMEM252Q8N6L7 170 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 OR5C1Q8NGR4 320 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 NEK7Q8TDX7 302 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 RBMXL1Q96E39 390 aaKnown RBP9.31□□□□□ -0.92
CCDC40-207ENST00000572253 CCDC74BQ96LY2 380 aa9.31□□□□□ -0.92
CCDC40-207ENST00000572253 LYRM2Q9NU23 88 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms