RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PPA2Q9H2U2 334 aa14.46□□□□□ -0.09
CTDNEP1-207ENST00000572043 DIMT1Q9UNQ2 313 aaKnown RBP14.46□□□□□ -0.09
CTDNEP1-207ENST00000572043 EXOSC1Q9Y3B2 195 aaKnown RBP14.46□□□□□ -0.09
CTDNEP1-207ENST00000572043 CLPSL1A2RUU4 121 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 SH2D1BO14796 132 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 LALBAP00709 142 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 ARG1P05089 322 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 RAB3AP20336 220 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 CAPGP40121 348 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR3A1P47881 315 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 ZP1P60852 638 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 DYNC1I2Q13409 638 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 OGFRL1Q5TC84 451 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 Q6ZSV7 163 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR5R1Q8NH85 324 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 LINC01006Q8NI28 216 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 PPP1R35Q8TAP8 253 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 HAVCR2Q8TDQ0 301 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 GPR148Q8TDV2 347 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 WFDC12Q8WWY7 111 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 GGHQ92820 318 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 NR1H4Q96RI1 486 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 GPER1Q99527 375 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 FAM192AQ9GZU8 254 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 CHCHD3Q9NX63 227 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 BABAM2Q9NXR7 383 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 RNF114Q9Y508 228 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 PCDHGB5Q9Y5G0 923 aa14.45□□□□□ -0.1
CTDNEP1-207ENST00000572043 A0A1B0GUS0 222 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 HSPB6O14558 160 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 MGST3O14880 152 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 MAGEB3O15480 346 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 IGHV1-8P0DP01 117 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 P2RX3P56373 397 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 RPL15P61313 204 aaKnown RBP14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 MEF2CQ06413 473 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 LRRC75BQ2VPJ9 315 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 CCDC58Q4VC31 144 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 ASPHD2Q6ICH7 369 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 SAXO1Q8IYX7 474 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 C8orf59Q8N0T1 100 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR13D1Q8NGV5 346 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 TNFAIP8L1Q8WVP5 186 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 ORAI1Q96D31 301 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 SLITRK2Q9H156 845 aa14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 SEBOXQ9HB31 216 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-207ENST00000572043 PNMA8CA0A1B0GUJ8 204 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 GABRPO00591 440 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 DEGS1O15121 323 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 XPNPEP2O43895 674 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 MMP23AO75900 390 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 CD2P06729 351 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 KRTAP10-3P60369 221 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 AESQ08117 197 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 ST3GAL4Q11206 333 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 MED21Q13503 144 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 LAIR2Q6ISS4 152 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 BRICD5Q6PL45 260 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 DYNAPQ8N1N2 210 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR10K1Q8NGX5 313 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 TMEM106AQ96A25 262 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 MEGF9Q9H1U4 602 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 LINC00312Q9Y6C7 94 aa14.43□□□□□ -0.1
CTDNEP1-207ENST00000572043 A0A0G2JK05 382 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 CASQ2O14958 399 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 ALX3O95076 343 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 GLIPR1P48060 266 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 ATXN7L3Q14CW9 347 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 Q6P435 159 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 BAIAP2L2Q6UXY1 529 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 AHSA2Q719I0 299 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 BPIFB6Q8NFQ5 453 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 RPS4Y2Q8TD47 263 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 GHSRQ92847 366 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 SMIM19Q96E16 107 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 NKX1-2Q9UD57 310 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 ZNF281Q9Y2X9 895 aa14.42□□□□□ -0.1
CTDNEP1-207ENST00000572043 FAM172BPA6NC97 362 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 SLC33A1O00400 549 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 OGG1O15527 345 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 RBP4P02753 201 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 TGFBR2P37173 567 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR3A4PP47883 348 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 RAB13P51153 203 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 PPP3R1P63098 170 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 FAM189A2Q15884 450 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 SSX2Q16385 188 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 PRR31Q5SQ13 230 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 LDLRAD2Q5SZI1 272 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 PRAMEF5Q5TYX0 476 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 ZNF529Q6P280 563 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 STX19Q8N4C7 294 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 OR52N1Q8NH53 320 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 CPNE2Q96FN4 548 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 VCXQ9H320 206 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 SIGLEC9Q9Y336 463 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 SESN1Q9Y6P5 492 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 HSPE1-MOB4S4R3N1 261 aa14.41□□□□□ -0.1
CTDNEP1-207ENST00000572043 TRGV10A0A0A0MS01 117 aa14.4□□□□□ -0.1
CTDNEP1-207ENST00000572043 A0A1W2PPK0 400 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms