RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 NOX4Q9NPH5 578 aa8.35□□□□□ -1.07
GTF3C1-213ENST00000571886 CHCHD3Q9NX63 227 aaKnown RBP8.35□□□□□ -1.07
GTF3C1-213ENST00000571886 TRBV5-7A0A0A0MS05 114 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 A0A0G2JK05 382 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 C17orf98A8MV24 154 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 H0YJX3 145 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 MMP23AO75900 390 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 CDRT1O95170 752 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 CYB5AP00167 134 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 ALDOBP05062 364 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 CELP19835 753 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 GABRR1P24046 479 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 LMO1P25800 156 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 SAA4P35542 130 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 IER3P46695 156 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 OR3A4PP47883 348 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 BMXP51813 675 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 UBE2E1P51965 193 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 WNT4P56705 351 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 RELBQ01201 579 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 SCN1BQ07699 218 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 BLMHQ13867 455 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 INSL4Q14641 139 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 GRK1Q15835 563 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 LDLRAD2Q5SZI1 272 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 FIP1L1Q6UN15 594 aaKnown RBP8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 BAIAP2L2Q6UXY1 529 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 ASCL4Q6XD76 172 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 SAXO1Q8IYX7 474 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 ZSCAN4Q8NAM6 433 aaPredicted RBP8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 SLC25A28Q96A46 364 aa8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 NR1H4Q96RI1 486 aaPredicted RBP8.34□□□□□ -1.07
GTF3C1-213ENST00000571886 MEIOCA2RUB1 952 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 SLC33A1O00400 549 aaPredicted RBP8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 SH2D1BO14796 132 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 MYL12BO14950 172 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 GPX5O75715 221 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 ZNF728P0DKX0 622 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 MYF6P23409 242 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 COX7A1P24310 79 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 GLIPR1P48060 266 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 GP2P55259 537 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 SLC35A2P78381 396 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 GUCA2AQ02747 115 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 AESQ08117 197 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 MED21Q13503 144 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 IRF3Q14653 427 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 TAF9Q16594 264 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 Q499Y3 187 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 YIF1BQ5BJH7 314 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 SPIN3Q5JUX0 258 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 NCR3LG1Q68D85 454 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 IZUMO2Q6UXV1 221 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 GDPD3Q7L5L3 318 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 LHFPL4Q7Z7J7 247 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 LDLRAD3Q86YD5 345 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 DYNAPQ8N1N2 210 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 PXT1Q8NFP0 134 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 OR5D13Q8NGL4 314 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 TNFAIP8L1Q8WVP5 186 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 COQ2Q96H96 371 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 CYYR1Q96J86 154 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 OR14A2Q96R54 314 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 PPA2Q9H2U2 334 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 ZMAT3Q9HA38 289 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 EXOSC4Q9NPD3 245 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 ING3Q9NXR8 418 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 ZNRD1Q9P1U0 126 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 ING4Q9UNL4 249 aa8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 LSM2Q9Y333 95 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 SF3B6Q9Y3B4 125 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-213ENST00000571886 TRAV24A0A0B4J272 114 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 A0A1W2PP11 408 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 MGST3O14880 152 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 DEGS1O15121 323 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 HTR3BO95264 441 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 CD2P06729 351 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 ZNF44P15621 663 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 MDKP21741 143 aaPredicted RBP8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 EEF1B2P24534 225 aaKnown RBP8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 BDKRB2P30411 391 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 TGFBR2P37173 567 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 GDNFP39905 211 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 PTGFRP43088 359 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 MTNR1BP49286 362 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 PIGYQ3MUY2 71 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 UTF1Q5T230 341 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 FAM27D1Q5T7N8 215 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 DDI2Q5TDH0 399 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 RNLSQ5VYX0 342 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 ELP2Q6IA86 826 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 Q8NFD4 153 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 DERL3Q96Q80 235 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 GPER1Q99527 375 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 CDCA4Q9BXL8 241 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 ANKRD60Q9BZ19 345 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 FAM192AQ9GZU8 254 aa8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 PPIL3Q9H2H8 161 aaKnown RBP8.32□□□□□ -1.08
GTF3C1-213ENST00000571886 DUSP21Q9H596 190 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms