RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PP6455Q8WZ26 134 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 PELI1Q96FA3 418 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 ERVK13-1Q9NX77 482 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 FRRS1LQ9P0K9 344 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 SLC7A11Q9UPY5 501 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 MYRFQ9Y2G1 1151 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 HAND1O96004 215 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 SERPINA3P01011 423 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 CHRM2P08172 466 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 VSIG10L2P0DP72 767 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 CD28P10747 220 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 GDNFP39905 211 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 CAPGP40121 348 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 OR3A1P47881 315 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 FUT6P51993 359 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 SNU13P55769 128 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 FAM189A2Q15884 450 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 SSX2Q16385 188 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 SMN1Q16637 294 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 LAIR2Q6ISS4 152 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 OR52I1Q8NGK6 324 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 CNIH3Q8TBE1 160 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 TFAP2CQ92754 450 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 RFT1Q96AA3 541 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 JAM3Q9BX67 310 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 CDCA4Q9BXL8 241 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 HSPE1-MOB4S4R3N1 261 aa11.14□□□□□ -0.63
GTF3C1-211ENST00000569653 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 H0YJX3 145 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 RBP4P02753 201 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 ZNF20P17024 532 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 AZGP1P25311 298 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 POU3F4P49335 361 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 LGALS4P56470 323 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 ALKBH1Q13686 389 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 KPRPQ5T749 579 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 Q6ZTK2 550 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 C8orf59Q8N0T1 100 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 ZNF676Q8N7Q3 588 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 OR2T6Q8NHC8 308 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 EMG1Q92979 244 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 SNX22Q96L94 193 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 ZNF714Q96N38 554 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 NPFFR1Q9GZQ6 430 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 HHLA2Q9UM44 414 aa11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-211ENST00000569653 IGHV2-26A0A0B4J1V2 119 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 A0A0G2JK05 382 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 TRBV2A0A0J9YWF9 115 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 TMEM212A6NML5 194 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 OPN1MWP04001 364 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 CCDC159P0C7I6 412 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 ATF1P18846 271 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 DCKP27707 260 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 GBX2P52951 348 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 BLCAPP62952 87 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 MED21Q13503 144 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 ZNF146Q15072 292 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 GRK1Q15835 563 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 GDPD3Q7L5L3 318 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 DNAAF1Q8NEP3 725 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 OR13D1Q8NGV5 346 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 FBLIM1Q8WUP2 373 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 FGGYQ96C11 551 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 BORCS8Q96FH0 119 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 ZNF649Q9BS31 505 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 COMMD4Q9H0A8 199 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 SEBOXQ9HB31 216 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
GTF3C1-211ENST00000569653 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 hCG_1809904A0A1W2PP81 198 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 A0A1W2PPE2 198 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 A0A1W2PR64 198 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 A0A1W2PRV1 198 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 FAM172BPA6NC97 362 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 OR4C45A6NMZ5 311 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 FAM90A22PA8MWA6 464 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 SIRPB1O00241 398 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 MYL12AP19105 171 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 DYNLT3P51808 116 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 MEF2CQ06413 473 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 DYNC1I2Q13409 638 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 IZUMO2Q6UXV1 221 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 TMPRSS11AQ6ZMR5 421 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms