RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 KCNE4Q8WWG9 221 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 PSMF1Q92530 271 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 MARS2Q96GW9 593 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 Q96M66 194 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 SCGB3A2Q96PL1 93 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 GPHA2Q96T91 129 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 PAPOLGQ9BWT3 736 aaKnown RBP7.59□□□□□ -1.19
LINC00558-201ENST00000569422 LIME1Q9H400 295 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 GHRLQ9UBU3 117 aa7.59□□□□□ -1.19
LINC00558-201ENST00000569422 C5orf49A4QMS7 147 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 FIGNL2A6NMB9 653 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 C9orf172C9J069 976 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 SLC33A1O00400 549 aaPredicted RBP7.59□□□□□ -1.2
LINC00558-201ENST00000569422 FARS2O95363 451 aaKnown RBP7.59□□□□□ -1.2
LINC00558-201ENST00000569422 SERPINA7P05543 415 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 MPZP25189 248 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 CALCRP30988 508 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 HIST1H3AP68431 136 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.2
LINC00558-201ENST00000569422 FAM3AP98173 230 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 CNN3Q15417 329 aaKnown RBP7.59□□□□□ -1.2
LINC00558-201ENST00000569422 SSX2Q16385 188 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 ABCA11PQ4W5N1 156 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 ATP1A1-AS1Q5TC04 95 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 HIST2H3PS2Q5TEC6 136 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 DHRS13Q6UX07 377 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 HIST2H3AQ71DI3 136 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 CALHM1Q8IU99 346 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 OR5L1Q8NGL2 311 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 OR10J5Q8NHC4 309 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 CPT1CQ8TCG5 803 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 CPNE2Q96FN4 548 aaPredicted RBP7.59□□□□□ -1.2
LINC00558-201ENST00000569422 ADAT1Q9BUB4 502 aaKnown RBP7.59□□□□□ -1.2
LINC00558-201ENST00000569422 STRADBQ9C0K7 418 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 HRH4Q9H3N8 390 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 OPA3Q9H6K4 179 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 ANXA10Q9UJ72 324 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 SLC7A11Q9UPY5 501 aa7.59□□□□□ -1.2
LINC00558-201ENST00000569422 TTC28Q96AY4 2481 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 A0A1B0GW55 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 H7C1Q1 480 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 WRBO00258 174 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 MSTNO14793 375 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 CST2P09228 141 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4L2P0CJ85 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4L3P0CJ86 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4L4P0CJ87 422 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4L5P0CJ88 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4L6P0CJ89 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4L7P0CJ90 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 RCC1P18754 421 aaPredicted RBP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 PIGPP57054 158 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 CYCSP99999 105 aaKnown RBP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF345Q14585 488 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 OR2A2Q6IF42 318 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 SGPP2Q8IWX5 399 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 OR10AD1Q8NGE0 317 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 OR11L1Q8NGX0 322 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 NEK7Q8TDX7 302 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 ASB13Q8WXK3 278 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 PIK3IP1Q96FE7 263 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 LRRC46Q96FV0 321 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 DUX4Q9UBX2 424 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 FREM1Q5H8C1 2179 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 MARCH11A6NNE9 402 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF705EA8MWA4 302 aaPredicted RBP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 LAMA5O15230 3695 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 IFNA2P01563 188 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 TPT1P13693 172 aaKnown RBP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 HLA-GP17693 338 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 FCGR2CP31995 323 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 LHFPL1Q86WI0 220 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 BAP18Q8IXM2 172 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 OSR2Q8N2R0 312 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 MRPL24Q96A35 216 aaKnown RBP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 NMES1Q9C002 83 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 IL17BQ9UHF5 180 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
LINC00558-201ENST00000569422 PUS1Q9Y606 427 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00558-201ENST00000569422 C19orf67A6NJJ6 358 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 F12P00748 615 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 TAS2R60P59551 318 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 OR1C1Q15619 314 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 AKIRIN2Q53H80 203 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 RPL7L1Q6DKI1 246 aaKnown RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 FOXL2NBQ6ZUU3 175 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 HSD17B13Q7Z5P4 300 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF611Q8N823 705 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ZBTB34Q8NCN2 500 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 NANPQ8TBE9 248 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 SLAMF9Q96A28 289 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 SPSB1Q96BD6 273 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 C2orf50Q96LR7 162 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 TM2D1Q9BX74 207 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 RAB18Q9NP72 206 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 C19orf12Q9NSK7 152 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 CRIM1Q9NZV1 1036 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 IL36RNQ9UBH0 155 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms