RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TMEM72A0PK05 275 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 TMEM150BA6NC51 233 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 A6NJ64 397 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 COLCA2A8K830 154 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CCL25O15444 150 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 INSP01308 110 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 TRBC1P01850 177 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CD5P06127 495 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CSF3P09919 207 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 GABRA1P14867 456 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 PGAM1P18669 254 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 PSMB5P28074 263 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 OTX1P32242 354 aaPredicted RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 MAS1LP35410 378 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 PMELP40967 661 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 NCBP2P52298 156 aaKnown RBP eCLIP3.96□□□□□ -1.78
UBR1-208ENST00000569066 VSX2P58304 361 aaPredicted RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 HOXC5Q00444 222 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 MXD1Q05195 221 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 TMED2Q15363 201 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 RSU1Q15404 277 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 DEFB115Q30KQ5 88 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 C8orf59Q8N0T1 100 aaPredicted RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 OR4C5Q8NGB2 326 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 OR4F15Q8NGB8 312 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 GNPDA2Q8TDQ7 276 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CXorf40AQ8TE69 158 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 IMMP1LQ96LU5 166 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 NIPSNAP1Q9BPW8 284 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CHST5Q9GZS9 411 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CSNK1G1Q9HCP0 422 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 NEU3Q9UQ49 428 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 HEBP2Q9Y5Z4 205 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 SPEF2Q9C093 1822 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 SNAPC4Q5SXM2 1469 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 GLYATL1P3A0A0U1RQE8 302 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 A0A1B0GW55 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 GJE1A6NN92 205 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 HIDE1A8MVS5 230 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 C8GP07360 202 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L2P0CJ85 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L3P0CJ86 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L4P0CJ87 422 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L5P0CJ88 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L6P0CJ89 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L7P0CJ90 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 MGMTP16455 207 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 AQP2P41181 271 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 AKR1C3P42330 323 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 IDH2P48735 452 aaKnown RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 BTG2P78543 158 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 PSG7Q13046 419 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ATP6V1FQ16864 119 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 LRRC10Q5BKY1 277 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DNLZQ5SXM8 178 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 OTPQ5XKR4 325 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4L9Q6RFH8 374 aaPredicted RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 ABHD12BQ7Z5M8 362 aaPredicted RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 HS3ST5Q8IZT8 346 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 OR10K1Q8NGX5 313 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 RHEBL1Q8TAI7 183 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 CD200R1Q8TD46 325 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ECHDC3Q96DC8 303 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 Q96MT0 163 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ZNF426Q9BUY5 554 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 NMNAT1Q9HAN9 279 aaPredicted RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 WFDC1Q9HC57 220 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 MMP26Q9NRE1 261 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 FAM49BQ9NUQ9 324 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 MTCH1Q9NZJ7 389 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 DUX4Q9UBX2 424 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 GNG8Q9UK08 70 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 KIF1AQ12756 1690 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 SHPRHQ149N8 1683 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 URB2Q14146 1524 aaKnown RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 MYH3P11055 1940 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ADAMTS9Q9P2N4 1935 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 KIF20BQ96Q89 1820 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 WIZO95785 1651 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 GCC2Q8IWJ2 1684 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 A0A096LPI6 279 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 D6RAR5 112 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 PANO1I0J062 215 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 M0R143 59 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 KPNA3O00505 521 aaPredicted RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 MYL12BO14950 172 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ZMPSTE24O75844 475 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 UTS2O95399 124 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 MYL12AP19105 171 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 CD82P27701 267 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 SLC6A1P30531 599 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 ETV6P41212 452 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 RAB10P61026 200 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 RRAS2P62070 204 aaPredicted RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 RPS21P63220 83 aaKnown RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 PTPN20Q4JDL3 420 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 RBM48Q5RL73 367 aaKnown RBP3.95□□□□□ -1.78
UBR1-208ENST00000569066 AHSA2Q719I0 299 aa3.95□□□□□ -1.78
UBR1-208ENST00000569066 MRPL21Q7Z2W9 205 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms