RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	RBP2	P50120	134 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CRISP1	P54107	249 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ATP1B3	P54709	279 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	RPL23A	P62750	156 aa	Known RBP	12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	DGCR2	P98153	550 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	HLA-DRB5	Q30154	266 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	KLHL22	Q53GT1	634 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	NXNL2	Q5VZ03	156 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ETV3L	Q6ZN32	361 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	RNF144B	Q7Z419	303 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	THNSL2	Q86YJ6	484 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM58A	Q8N1B3	248 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ADI1	Q9BV57	179 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ADGRL4	Q9HBW9	690 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676	MRM2	Q9UI43	246 aa	Known RBP	12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676		U3KQK5	164 aa		12.51	□□□□□ -0.41
HERPUD1-215	ENST00000568676		A0A087X0M5	115 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676		A0A1B0GX30	115 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	SH2D1B	O14796	132 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	MMP23A	O75900	390 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR3A1	P47881	315 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	KPNB1	Q14974	876 aa	Known RBP	12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	C9orf152	Q5JTZ5	239 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	TPTE2P1	Q5T6R2	138 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	C10orf99	Q6UWK7	81 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR4D6	Q8NGJ1	314 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	NRBF2	Q96F24	287 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	RHOF	Q9HBH0	211 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	DNAH9	Q9NYC9	4486 aa		12.5	□□□□□ -0.41
HERPUD1-215	ENST00000568676	C3orf84	H3BNL1	204 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	LY6L	H3BQJ8	138 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ENTPD6	O75354	484 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM107A	O95990	144 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CSN2	P05814	226 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PRKACG	P22612	351 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PTGFR	P43088	359 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	SLC35B1	P78383	322 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PTGES3	Q15185	160 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PRAMEF5	Q5TYX0	476 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR2W3	Q7Z3T1	314 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CATSPERD	Q86XM0	798 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	GID4	Q8IVV7	300 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	YIPF7	Q8N8F6	280 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	BCAS4	Q8TDM0	211 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CANT1	Q8WVQ1	401 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	NSL1	Q96IY1	281 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	P2RX4	Q99571	388 aa		12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	EXOSC4	Q9NPD3	245 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	RBFOX1	Q9NWB1	397 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A18P	A6NE21	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A16P	A6NEW6	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A20P	A6NIJ5	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A9P	A6NNJ1	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A12P	A8MX19	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A5P	A8MXJ8	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676		H0YHG0	523 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FGF16	O43320	207 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PRKY	O43930	277 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	SULT1C4	O75897	302 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	INMT	O95050	263 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A15P	P0C7V4	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A13P	P0C7W8	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A14P	P0C7W9	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	FAM90A24P	P0C7X0	464 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	UBC	P0CG48	685 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PRKACA	P17612	351 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CALB2	P22676	271 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PRKACB	P22694	351 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR3A4P	P47883	348 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	AADACL4	Q5VUY2	407 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	PLEKHG7	Q6ZR37	379 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	HS3ST5	Q8IZT8	346 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CHST4	Q8NCG5	386 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	CCDC124	Q96CT7	223 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ZNF286A	Q9HBT8	521 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	HMG20A	Q9NP66	347 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	KRT84	Q9NSB2	600 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	IL36RN	Q9UBH0	155 aa		12.48	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ZNF729	A6NN14	1252 aa	Predicted RBP	12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	NUDT19	A8MXV4	375 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	MAGEB4	O15481	346 aa	Predicted RBP	12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	RPP14	O95059	124 aa	Known RBP	12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	BCL3	P20749	454 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	NPBWR2	P48146	333 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	MTCP1	P56278	107 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	EFNB1	P98172	346 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	LHFPL2	Q6ZUX7	228 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	UTS2B	Q765I0	119 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR9G1	Q8NH87	305 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	TMEM163	Q8TC26	289 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	RPE	Q96AT9	228 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	SPSB1	Q96BD6	273 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	COMMD4	Q9H0A8	199 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR6C3	Q9NZP0	311 aa		12.47	□□□□□ -0.41
HERPUD1-215	ENST00000568676	ODAM	A1E959	279 aa		12.46	□□□□□ -0.41
HERPUD1-215	ENST00000568676	METTL15	A6NJ78	407 aa		12.46	□□□□□ -0.41
HERPUD1-215	ENST00000568676	SH2D7	A6NKC9	451 aa	Predicted RBP	12.46	□□□□□ -0.41
HERPUD1-215	ENST00000568676	SIRPB1	O00241	398 aa		12.46	□□□□□ -0.41
HERPUD1-215	ENST00000568676	OR2H2	O95918	312 aa		12.46	□□□□□ -0.41

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