RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SFRP2Q96HF1 295 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 Q96MT0 163 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC38A2Q96QD8 506 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 TSNAXQ99598 290 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 GINS4Q9BRT9 223 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 NIPSNAP3BQ9BS92 247 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 ALG12Q9BV10 488 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 GGACTQ9BVM4 153 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 HINT2Q9BX68 163 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 POLR2J2Q9GZM3 115 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 POLR2J3Q9H1A7 115 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 C20orf85Q9H1P6 137 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 GEMIN7Q9H840 131 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 ELOVL3Q9HB03 270 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 CACYBPQ9HB71 228 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 HRASLSQ9HDD0 168 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC17A5Q9NRA2 495 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 SIRT7Q9NRC8 400 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 FAM49BQ9NUQ9 324 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 SMOXQ9NWM0 555 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 IL36GQ9NZH8 169 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 PHF11Q9UIL8 331 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 KLK12Q9UKR0 248 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 MMACHCQ9Y4U1 282 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 WSB1Q9Y6I7 421 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 URGCP-MRPS24S4R325 110 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 COL4A6Q14031 1691 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 MYO15AQ9UKN7 3530 aa2.37□□□□□ -2.03
HERPUD1-212ENST00000567944 SPAG17Q6Q759 2223 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ASXL3Q9C0F0 2248 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SPTA1P02549 2419 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 UNC79Q9P2D8 2635 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 A0A1B0GUS0 222 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C20orf202A1L168 122 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C9orf170A2RU37 121 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ARL5CA6NH57 179 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C1orf196B1AJZ1 125 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C5orf58C9J3I9 102 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 RNASEK-C17orf49H0YIS7 233 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 H3BN98 237 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 TEX46H3BTG2 121 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 M0R143 59 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 DCTN6O00399 190 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC17A3O00476 420 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 KDELR3O43731 214 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ORC5O43913 435 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 TTC4O95801 387 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 MOSP00540 346 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 IFNA5P01569 189 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 FTH1P02794 183 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ERCC1P07992 297 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 CHTF8P0CG12 524 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SMIM10L1P0DMW3 83 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 HLA-EP13747 358 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF44P15621 663 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PVALBP20472 110 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 F2RP25116 425 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 IVDP26440 423 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 S100GP29377 79 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 DDTP30046 118 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 GGT2P36268 569 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ETV6P41212 452 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 CSNK1EP49674 416 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 CCR6P51684 374 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 KLF3P57682 345 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4D2P58180 307 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PPP3R1P63098 170 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 EMX2Q04743 252 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 MGAT3Q09327 533 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C1orf61Q13536 156 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 IRF4Q15306 451 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 TAF1AQ15573 450 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 MAPK14Q16539 360 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ATP6V1FQ16864 119 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C18orf21Q32NC0 220 aaPredicted RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 VPS26BQ4G0F5 336 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 XKR7Q5GH72 579 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PIGGQ5H8A4 983 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PABPC1L2AQ5JQF8 200 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 CLLU1Q5K131 121 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 C1orf100Q5SVJ3 147 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 AVPI1Q5T686 147 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF691Q5VV52 312 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 EIF5AL1Q6IS14 154 aaKnown RBP2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 DCUN1D2Q6PH85 259 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SPESP1Q6UW49 350 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 COX15Q7KZN9 410 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SSX7Q7RTT5 188 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 GRINAQ7Z429 371 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 ARPINQ7Z6K5 226 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 COMMD7Q86VX2 200 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PRSS58Q8IYP2 241 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC35F6Q8N357 371 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 Q8N402 240 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 STPG2Q8N412 459 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 PROKR2Q8NFJ6 384 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 OR8J1Q8NGP2 316 aa2.36□□□□□ -2.03
HERPUD1-212ENST00000567944 OR11L1Q8NGX0 322 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms