RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 IL15RAQ13261 267 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 BAP18Q8IXM2 172 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 OR1K1Q8NGR3 316 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 NEK7Q8TDX7 302 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 HIST1H2AAQ96QV6 131 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 A0A1B0GW55 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 KRBOX1C9JBD0 128 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4L2P0CJ85 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4L3P0CJ86 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4L4P0CJ87 422 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4L5P0CJ88 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4L6P0CJ89 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4L7P0CJ90 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 PET100P0DJ07 73 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 GLP1RP43220 463 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 TSC22D1Q15714 1073 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 FBXW9Q5XUX1 488 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 OR2T2Q6IF00 324 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 OR2A2Q6IF42 318 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 SLC38A6Q8IZM9 456 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 SPERTQ8NA61 448 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 OR1S2Q8NGQ3 325 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 PARD6AQ9NPB6 346 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 DUX4Q9UBX2 424 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 PCDHB10Q9UN67 800 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 KCNIP3Q9Y2W7 256 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 BET1O15155 118 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 IFNA21P01568 189 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 STK11Q15831 433 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 TMEM211Q6ICI0 200 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 LYZL2Q7Z4W2 148 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 TMEM178AQ8NBL3 297 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 NARS2Q96I59 477 aaKnown RBP16.05■□□□□ 0.16
MSLN-207ENST00000566549 SPEF1Q9Y4P9 236 aa16.05■□□□□ 0.16
MSLN-207ENST00000566549 TRAPPC2LH3BP13 241 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 SS18L1O75177 396 aaPredicted RBP16.04■□□□□ 0.16
MSLN-207ENST00000566549 CST4P01036 141 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 FTH1P19P0C7X4 201 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 LYL1P12980 280 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 PRKACAP17612 351 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 TNFSF10P50591 281 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 ARHGDIBP52566 201 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 HERV-K104P61576 105 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 P4HA3Q7Z4N8 544 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 MYPOPQ86VE0 399 aaPredicted RBP16.04■□□□□ 0.16
MSLN-207ENST00000566549 SLC30A7Q8NEW0 376 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 STOML3Q8TAV4 291 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 AQP10Q96PS8 301 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 SHARPINQ9H0F6 387 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 SHANK1Q9Y566 2161 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 B8ZZF3 427 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 CELA3BP08861 270 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 CA6P23280 308 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 SOX8P57073 446 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 FGF12P61328 243 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 BTN1A1Q13410 526 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 TMEM187Q14656 261 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 C17orf78Q8N4C9 275 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 CNTNAP3BQ96NU0 1288 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 CNTNAP3Q9BZ76 1288 aa16.04■□□□□ 0.16
MSLN-207ENST00000566549 APOC3P02656 99 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 SUMF1Q8NBK3 374 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 BCL2L2Q92843 193 aaPredicted RBP16.03■□□□□ 0.16
MSLN-207ENST00000566549 MOB3AQ96BX8 217 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 GPHA2Q96T91 129 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 IGHV3-64DA0A0J9YX35 117 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 ANKRD30BLA7E2S9 258 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 PHF1O43189 567 aaPredicted RBP16.03■□□□□ 0.16
MSLN-207ENST00000566549 DIRAS3O95661 229 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 PPYP01298 95 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 SCTP09683 121 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 RCC1P18754 421 aaPredicted RBP16.03■□□□□ 0.16
MSLN-207ENST00000566549 AKR1C2P52895 323 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 AKR1C1Q04828 323 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 CLEC9AQ6UXN8 241 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 MKXQ8IYA7 352 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 SLC5A7Q9GZV3 580 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
MSLN-207ENST00000566549 LRP3O75074 770 aa16.02■□□□□ 0.16
MSLN-207ENST00000566549 HOXD4P09016 255 aaPredicted RBP16.02■□□□□ 0.16
MSLN-207ENST00000566549 HKR1P10072 659 aa16.02■□□□□ 0.16
MSLN-207ENST00000566549 RPL7L1Q6DKI1 246 aaKnown RBP16.02■□□□□ 0.16
MSLN-207ENST00000566549 TFAP2EQ6VUC0 442 aa16.02■□□□□ 0.16
MSLN-207ENST00000566549 MEX3BQ6ZN04 569 aaKnown RBP16.02■□□□□ 0.16
MSLN-207ENST00000566549 EIF4E3Q8N5X7 224 aaKnown RBP16.02■□□□□ 0.16
MSLN-207ENST00000566549 OR5P3Q8WZ94 311 aa16.02■□□□□ 0.16
MSLN-207ENST00000566549 SMIM3Q9BZL3 60 aa16.02■□□□□ 0.16
MSLN-207ENST00000566549 OTOGLQ3ZCN5 2332 aa16.02■□□□□ 0.16
MSLN-207ENST00000566549 HS3ST1O14792 307 aa16.02■□□□□ 0.15
MSLN-207ENST00000566549 LYZL6O75951 148 aa16.02■□□□□ 0.15
MSLN-207ENST00000566549 WT1P19544 449 aaPredicted RBP16.02■□□□□ 0.15
MSLN-207ENST00000566549 SMCO1Q147U7 214 aa16.02■□□□□ 0.15
MSLN-207ENST00000566549 PIP4P1Q86T03 277 aa16.02■□□□□ 0.15
MSLN-207ENST00000566549 Q8NFD4 153 aa16.02■□□□□ 0.15
MSLN-207ENST00000566549 OR5A2Q8NGI9 324 aa16.02■□□□□ 0.15
MSLN-207ENST00000566549 RHBDL1O75783 438 aa16.01■□□□□ 0.15
MSLN-207ENST00000566549 M6PRP20645 277 aa16.01■□□□□ 0.15
MSLN-207ENST00000566549 GLRX5Q86SX6 157 aa16.01■□□□□ 0.15
MSLN-207ENST00000566549 BPIFCQ8NFQ6 507 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms