RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 IFI44Q8TCB0 444 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 SLAMF9Q96A28 289 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 HSPB6O14558 160 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 GPR37O15354 613 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 ONECUT2O95948 504 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 CST2P09228 141 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 NPBWR2P48146 333 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 STARD6P59095 220 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 RAC3P60763 192 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 IL13RA2Q14627 380 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 ADAM5Q6NVV9 412 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
CDH1-209ENST00000566510 SLC25A26Q70HW3 274 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 FAM24BQ8N5W8 94 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 CCDC71LQ8N9Z2 235 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 NANPQ8TBE9 248 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 UBE2J1Q9Y385 318 aaPredicted RBP12.32□□□□□ -0.44
CDH1-209ENST00000566510 ZNF407Q9C0G0 2248 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 FRYQ5TBA9 3013 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 LOC102723996A0A087X1L8 192 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 FAM24AA6NFZ4 105 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 PDCD6O75340 191 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 NXPH3O95157 252 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 F10P00742 488 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 MT-ND4LP03901 98 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 CFIP05156 583 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 FUT6P51993 359 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 SUCLG1P53597 346 aaKnown RBP12.32□□□□□ -0.44
CDH1-209ENST00000566510 OR2B8PP59922 312 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 CALHM1Q8IU99 346 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 MOB3AQ96BX8 217 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 FOXB1Q99853 325 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 RSRP1Q9BUV0 290 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH1-209ENST00000566510 NCKAP5O14513 1909 aa12.32□□□□□ -0.44
CDH1-209ENST00000566510 C3orf85A0A1B0GTC6 90 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 NKX2-6A6NCS4 301 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 K7ESF4 209 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 KLF7O75840 302 aaPredicted RBP12.31□□□□□ -0.44
CDH1-209ENST00000566510 PPYP01298 95 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
CDH1-209ENST00000566510 ACAA1P09110 424 aaPredicted RBP12.31□□□□□ -0.44
CDH1-209ENST00000566510 PPP1CCP36873 323 aaKnown RBP12.31□□□□□ -0.44
CDH1-209ENST00000566510 ZNF611Q8N823 705 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 PBDC1Q9BVG4 233 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 ZNF700Q9H0M5 742 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 ARV1Q9H2C2 271 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 P04436 131 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 FGF5P12034 268 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 FOLR2P14207 255 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 POLR2GP62487 172 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDH1-209ENST00000566510 CTAG1AP78358 180 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 EWSR1Q01844 656 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDH1-209ENST00000566510 IL11RAQ14626 422 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 C9orf135Q5VTT2 229 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 COMMD1Q8N668 190 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 LRTM2Q8N967 370 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 ZFP62Q8NB50 900 aaPredicted RBP12.31□□□□□ -0.44
CDH1-209ENST00000566510 RARRES2Q99969 163 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 TMED3Q9Y3Q3 217 aa12.31□□□□□ -0.44
CDH1-209ENST00000566510 URB1O60287 2271 aaKnown RBP12.3□□□□□ -0.44
CDH1-209ENST00000566510 A0A1W2PPE3 182 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 OR6C6A6NF89 314 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 MPPED1O15442 326 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 SSSCA1O60232 199 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 FUT3P21217 361 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 RBM11P57052 281 aaKnown RBP12.3□□□□□ -0.44
CDH1-209ENST00000566510 Q6ZPA2 131 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 ZNF561Q8N587 486 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 CPT1CQ8TCG5 803 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 SF3B5Q9BWJ5 86 aaKnown RBP12.3□□□□□ -0.44
CDH1-209ENST00000566510 WNT5BQ9H1J7 359 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 SLC35B3Q9H1N7 401 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 A0A1W2PPE2 198 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 CDRT15L2A8MXV6 281 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 SULT1A1P50225 295 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 B2MP61769 119 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 FABP9Q0Z7S8 132 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 WIPI1Q5MNZ9 446 aaPredicted RBP12.3□□□□□ -0.44
CDH1-209ENST00000566510 OR2C3Q8N628 320 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 OR2G3Q8NGZ4 309 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 M1APQ8TC57 530 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 NAT6Q93015 286 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 SLC7A10Q9NS82 523 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 PARPBPQ9NWS1 579 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
CDH1-209ENST00000566510 STRAPQ9Y3F4 350 aaKnown RBP12.3□□□□□ -0.44
CDH1-209ENST00000566510 ZNF816-ZNF321PA0A0X1KG74 233 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms