RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	LIPF	P07098	398 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	CALCB	P10092	127 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	BCL3	P20749	454 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	OR3A1	P47881	315 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	MTNR1A	P48039	350 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	RAG2	P55895	527 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	COL10A1	Q03692	680 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	IL24	Q13007	206 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	SCGB2A2	Q13296	93 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	KCNJ8	Q15842	424 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	ZNF529	Q6P280	563 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	C16orf87	Q6PH81	154 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	SLC36A1	Q7Z2H8	476 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	TMEM86B	Q8N661	226 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	TPRX1	Q8N7U7	411 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	YIPF7	Q8N8F6	280 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	TMEM185A	Q8NFB2	350 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	OR51A2	Q8NGJ7	313 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	RHOXF1	Q8NHV9	184 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	WIPF2	Q8TF74	440 aa	Predicted RBP	5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	H1FX	Q92522	213 aa	Known RBP	5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	SLAMF9	Q96A28	289 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	RFT1	Q96AA3	541 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	RNFT2	Q96EX2	444 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	PKIB	Q9C010	78 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	S100A14	Q9HCY8	104 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	AMBN	Q9NP70	447 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	NOX4	Q9NPH5	578 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	GTF2A1L	Q9UNN4	478 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	POMT1	Q9Y6A1	747 aa		5.22	□□□□□ -1.57
TCF4-233	ENST00000566376	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	DNAH7	Q8WXX0	4024 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	NKX6-3	A6NJ46	265 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	DIRC3	C9JPN6	131 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376		K7N7A8	449 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	SYT7	O43581	403 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	SPRY1	O43609	319 aa	Predicted RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ANGPTL7	O43827	346 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	CLPX	O76031	633 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ZFPL1	O95159	310 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	TK1	P04183	234 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	KRT8	P05787	483 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	PIP	P12273	146 aa	Predicted RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	NDUFB7	P17568	137 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	AZGP1	P25311	298 aa	Known RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	PEX2	P28328	305 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	PRDX2	P32119	198 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	GABRA2	P47869	451 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	GTF2A1	P52655	376 aa	Predicted RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	BPIFB3	P59826	476 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	MZT1	Q08AG7	82 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	TMED1	Q13445	227 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	IL18R1	Q13478	541 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	CDK5R1	Q15078	307 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	LRRC10	Q5BKY1	277 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	COMMD2	Q86X83	199 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM185A	Q8N0U4	392 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	FTMT	Q8N4E7	242 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	C3orf56	Q8N813	242 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	BEND2	Q8NDZ0	799 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	OR4S1	Q8NGB4	309 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	OR4M1	Q8NGD0	313 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	OR52I1	Q8NGK6	324 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	OR13C5	Q8NGS8	318 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	SLC25A28	Q96A46	364 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ORAI1	Q96D31	301 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	COQ2	Q96H96	371 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	C4orf36	Q96KX1	117 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	PDCD1LG2	Q9BQ51	273 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ALG8	Q9BVK2	526 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	PRRG3	Q9BZD7	231 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	SLITRK2	Q9H156	845 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF696	Q9H7X3	374 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	MRPS18A	Q9NVS2	196 aa	Known RBP	5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM118A	Q9NWS6	357 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	GNG8	Q9UK08	70 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	VPREB3	Q9UKI3	123 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	SIGLEC9	Q9Y336	463 aa		5.21	□□□□□ -1.58
TCF4-233	ENST00000566376	TRBV2	A0A0J9YWF9	115 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM230A	A0A1W2PPH8	454 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CIB2	O75838	187 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	TSPAN9	O75954	239 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	INMT	O95050	263 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	GNAO1	P09471	354 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	UBC	P0CG48	685 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	DUSP1	P28562	367 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ETV1	P50549	477 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	RASSF2	P50749	326 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CCR9	P51686	369 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	UBE2E1	P51965	193 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	EFNB2	P52799	333 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	CDC42	P60953	191 aa		5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	RPS11	P62280	158 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ADARB1	P78563	741 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	ALKBH1	Q13686	389 aa	Known RBP	5.2	□□□□□ -1.58
TCF4-233	ENST00000566376	GALE	Q14376	348 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms