RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 MGAT4AQ9UM21 535 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 ST3GAL6Q9Y274 331 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 TRAV38-1A0A0B4J264 116 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 IGHV1-69-2A0A0G2JMI3 117 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 FAM221AA4D161 298 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 NKX6-3A6NJ46 265 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 ZNF736B4DX44 427 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 NDUFA2O43678 99 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 LANCL1O43813 399 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 OR7C1O76099 320 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 NDUFB6O95139 128 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 IL5P05113 134 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 MUC1P15941 1255 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 FUT3P21217 361 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 BTCP35070 178 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 TMEM50BP56557 158 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 TAS2R46P59540 309 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 UBE2MP61081 183 aaKnown RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 CCL8P80075 99 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 PAX5Q02548 391 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 MAB21L1Q13394 359 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 SURF2Q15527 256 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 MSMPQ1L6U9 139 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 MICBQ29980 383 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 STEAP1BQ6NZ63 245 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 FAHD2BQ6P2I3 314 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 WDR82Q6UXN9 313 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 MOGAT3Q86VF5 341 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 TMEM104Q8NE00 496 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 LILRB1Q8NHL6 650 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 NEUROG1Q92886 237 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 FAHD2AQ96GK7 314 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 SCGB3A2Q96PL1 93 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 BANF2Q9H503 90 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 UFSP2Q9NUQ7 469 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 PLEKHJ1Q9NW61 149 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 RCC2Q9P258 522 aaKnown RBP8.31□□□□□ -1.08
SF3B3-207ENST00000566095 KLK11Q9UBX7 282 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 PRR14LQ5THK1 2151 aa8.31□□□□□ -1.08
SF3B3-207ENST00000566095 TRBV6-6A0A0A6YYG2 114 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 A1L4Q6 167 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 MEIOCA2RUB1 952 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 SNRPGP15A8MWD9 76 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 SRRM5B3KS81 715 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 DISC1C4P0D8 188 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 MCRIP1C9JLW8 97 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 INMT-MINDY4F8WBC2 141 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 PYCARD-AS1I3L0S3 204 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 PDCD6O75340 191 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 PEX14O75381 377 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 FSTL3O95633 263 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 DANCRP0C864 163 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 BCL3P20749 454 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 GABRR1P24046 479 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 CHATP28329 748 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 BLVRBP30043 206 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-207ENST00000566095 MDH2P40926 338 aaKnown RBP8.3□□□□□ -1.08
SF3B3-207ENST00000566095 VEGFCP49767 419 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 GNG2P59768 71 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 ERVK11-1P61568 191 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 IKZF1Q13422 519 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 ARFRP1Q13795 201 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 ZNF146Q15072 292 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 GRK1Q15835 563 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 DMRTC1Q5HYR2 192 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 PRAMEF6Q5VXH4 476 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 BIVMQ86UB2 503 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 TMEM17Q86X19 198 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 HOGA1Q86XE5 327 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 CADM3Q8N126 398 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 MUC20Q8N307 709 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-207ENST00000566095 OR10K1Q8NGX5 313 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 RDH5Q92781 318 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 CCL19Q99731 98 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 DNTTIP1Q9H147 329 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 GCM1Q9NP62 436 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 RAB9BQ9NP90 201 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 MTCH1Q9NZJ7 389 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 NLKQ9UBE8 527 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 LAMP3Q9UQV4 416 aa8.3□□□□□ -1.08
SF3B3-207ENST00000566095 UBR5O95071 2799 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-207ENST00000566095 IGKV1-12A0A0C4DH73 117 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 HMX3A6NHT5 357 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 DEGS1O15121 323 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 SYNGR1O43759 233 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 CLDN1O95832 211 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 IGKV1D-12P01611 117 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 SFTPBP07988 381 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 ZNF44P15621 663 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 SRSF1Q07955 248 aaKnown RBP eCLIP8.29□□□□□ -1.089e-6■□□□□ 8.7
SF3B3-207ENST00000566095 MST1LQ2TV78 715 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 RNASE10Q5GAN6 216 aaKnown RBP8.29□□□□□ -1.08
SF3B3-207ENST00000566095 TMEM255AQ5JRV8 349 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 PLAC9Q5JTB6 97 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 ATAD3CQ5T2N8 411 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 METTL11BQ5VVY1 283 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 C11orf71Q6IPW1 123 aa8.29□□□□□ -1.08
SF3B3-207ENST00000566095 ACP7Q6ZNF0 438 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms